Gene Information

Name : Rru_A0298 (Rru_A0298)
Accession : YP_425390.1
Strain : Rhodospirillum rubrum ATCC 11170
Genome accession: NC_007643
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 364668 - 366167 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGACCCAAGCCGCCCCCCCGATCGACTGGACCGCCCGCGCCCGGGCCCTGCGGTTGCCCAACCACGCCCTCATCGACGG
CGCCCCGGCAAGCGCGGGCGATGGCGCCACCTTCGATTGCGTCAGCCCGATCGATGGCAGGGTGCTGACCCGGGTCGCCG
CCTGTGGCGCGGCCGATGTCGACCGCGCCGTGGCCGCCGGTCGCGCCGCCTTTGAAGACCGCCGCTGGTGCGGCCTGTCC
CCGGCGGCGCGCAAAAAGATCCTGCTGGCCTTCGCCGAGCGGATCGAGGCTCATCGCGACGAATTGGCGCTGCTGGAAAC
CCTCGACATGGGCAAGCCGATCGCCGACAGCCTCGCCGTCGACGTGCCGGCCACGGCGCGCTGTCTGCGCTGGTATGCCG
AGGCGCTCGACAAGGTTTATGGCGAAGTGGCGCCGACCGGCGACGACGTGCTGGCGACGATCACCCGCGAGCCTTTGGGC
GTCGTCGGCGTCGTCGTGCCGTGGAACTTCCCGATGATCATGGCCGCCTGGAAGATCGCCCCGGCCTTGGCGGCGGGCAA
TTCGGTGGTGCTGAAGCCGGCCGAGCAAAGCCCGCTGACCGCCATCCGTCTGGGCGAACTGGCCCTGGAGGCCGGGTTAC
CGGCCGGCGTGCTCAACGTCGTGCCCGGCCTGGGGCCGGTGACCGGGCGGGCCATCGGCCTGCATCCCGATATCGACGGC
GCCTTCTTCACCGGCTCGACGGCGGTGGGCAAGCTGTTCCTCAGCTATTCCAGCCAGTCGAACATGAAGCGCCTTGGCCT
CGAATGCGGCGGCAAAAGCGCCCATATCGTGCTGGCCTCGTGCAAGAACACCACGGCGGCCGCCCAGGCGGCGGCCTCGG
CGATCTTCTTTAATCAGGGCGAGATGTGCACGGCGGGCTCCCGGCTGATCGTCGAGCGCGCCATCGCCGACGAGGTGATC
GAAAAAGTCGTGGCCGAAGCCGCCTTCTGGCGCCCCGGCCCGCCGCTTGACCCCGCGACCCGCATGGGCGCCCTGGTCGA
TGCCGAGCAGACCGAGCGGGTGCTTGGCTATATCGCCCTTGGCCAAGACGAGGGCGCGCGGCTGGCGACCGGCGGCAGCC
GGGCCATGGCCGAAAGCGGCGGCTGCTATGTGGAGCCGACGATTTTCACCGGGGTCGCCCCGACCATGCGCATCGCCCGC
GAGGAGATCTTCGGACCGGTGCTTTCGGTGATCACCGTCGAGTCGGCCGATGAGGCGGTGCGAGTCGCCAATGACAGCGA
CTATGGCCTGGCGGCGGCGGTATGGAGCGACGATGTGACGACCCTTCACCGCGTCGCCAAACGCCTGCGCGCCGGCATGG
TCTATGCCAATTGCTATGACGCCGACGATATCACCGTACCCTTCGGCGGCTTCAAGCAATCGGGCATCGGCCGCGACAAG
TCCTTGCATGCCATCGACAAATATACGGAGCTGAAAACAACATGGTTGCGCCTGGGGTAA

Protein sequence :
MTQAAPPIDWTARARALRLPNHALIDGAPASAGDGATFDCVSPIDGRVLTRVAACGAADVDRAVAAGRAAFEDRRWCGLS
PAARKKILLAFAERIEAHRDELALLETLDMGKPIADSLAVDVPATARCLRWYAEALDKVYGEVAPTGDDVLATITREPLG
VVGVVVPWNFPMIMAAWKIAPALAAGNSVVLKPAEQSPLTAIRLGELALEAGLPAGVLNVVPGLGPVTGRAIGLHPDIDG
AFFTGSTAVGKLFLSYSSQSNMKRLGLECGGKSAHIVLASCKNTTAAAQAAASAIFFNQGEMCTAGSRLIVERAIADEVI
EKVVAEAAFWRPGPPLDPATRMGALVDAEQTERVLGYIALGQDEGARLATGGSRAMAESGGCYVEPTIFTGVAPTMRIAR
EEIFGPVLSVITVESADEAVRVANDSDYGLAAAVWSDDVTTLHRVAKRLRAGMVYANCYDADDITVPFGGFKQSGIGRDK
SLHAIDKYTELKTTWLRLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-127 63
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-63 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-63 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-63 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-63 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-63 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rru_A0298 YP_425390.1 aldehyde dehydrogenase VFG0082 Protein 1e-63 42