Gene Information

Name : Rru_A2893 (Rru_A2893)
Accession : YP_427977.1
Strain : Rhodospirillum rubrum ATCC 11170
Genome accession: NC_007643
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 3336136 - 3336996 bp
Length : 861 bp
Strand : -
Note : -

DNA sequence : 
ATGATGGCCCTGCTCGCCCAGCCGTTCGCCTATGACTACATGATCAACGCCATGTGGGTGAGCGCCCTGGTCGGCGGCGT
CTGCGCCTTTTTGTCGTGCTTCCTGATGCTCAAGGGCTGGTCGCTGATCGGCGACGCCCTGTCCCATGCCATCGTGCCCG
GCGTCGCCGGGGCGGCGATCATCGGCCTGCCGTTTTCCGTCGGCGCCTTTCTGGCCGGTGGGCTGGCGGCGGGGGCCATG
CTGTTTCTCAACCGGCGAACGCGGCTGAAGGAAGACGCGATCATCGGCCTGATCTTCACCTCGTTCCTCGGGTTGGGATT
GTTCATGATCTCGCTCGATCCGGCCTCGGTGAACGTCCAGACCATCGTGCTGGGCAATATCCTGGCGATCACCCGGGGCG
ATACCCTGCAGTTGGTGCTGATTTCAGGGATTTCCTTGGCCGTTTTGCTGGCCAAATGGAAAGATCTGATGGTCGCCTTC
TTCGATGAAAGCCATGCCCGCTCGGTCGGGCTCAATCCGGCGCTGCTGAAGGGCGTTTTCTTCACCCTGCTCAGCGCCTG
CACGGTGGCCGCCTTGCAGACCGTGGGCGCCTTCCTGGTCATCGCCATGGTGGTCACCCCCGGGGCCACCGCCTATCTGC
TGACCGACCGTTTTCCCCGACTGATCGTCCTGAGTGTTGGCCTGGGCGTGCTCAGTTGTCTGATCGGCACCTATCTCAGT
TTCTTCCTGGATGGGGCGACCGGCGGGGTGATCGTGGTTTTGCAGACCCTGGTCTTCCTGCTCGCCTTTTTGTTCGCCCC
CAAGCACGGGCTGCTGGCCGCCCGCTTGCGGGGACGCCGCATGCGGGAGGCCGGCCGATGA

Protein sequence : 
MMALLAQPFAYDYMINAMWVSALVGGVCAFLSCFLMLKGWSLIGDALSHAIVPGVAGAAIIGLPFSVGAFLAGGLAAGAM
LFLNRRTRLKEDAIIGLIFTSFLGLGLFMISLDPASVNVQTIVLGNILAITRGDTLQLVLISGISLAVLLAKWKDLMVAF
FDESHARSVGLNPALLKGVFFTLLSACTVAALQTVGAFLVIAMVVTPGATAYLLTDRFPRLIVLSVGLGVLSCLIGTYLS
FFLDGATGGVIVVLQTLVFLLAFLFAPKHGLLAARLRGRRMREAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-73 73
sitC NP_461784.1 permease Virulence SPI-1 Protein 4e-73 73
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-73 73
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-73 73
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 3e-73 73
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-34 43
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-34 43
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-34 43
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-34 43
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rru_A2893 YP_427977.1 ABC transporter BAC0351 Protein 2e-73 73
Rru_A2893 YP_427977.1 ABC transporter BAC0441 Protein 3e-66 66
Rru_A2893 YP_427977.1 ABC transporter BAC0352 Protein 8e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rru_A2893 YP_427977.1 ABC transporter VFG0527 Protein 2e-73 73
Rru_A2893 YP_427977.1 ABC transporter VFG0528 Protein 7e-35 43