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Name : Rru_A2008 (Rru_A2008) Accession : YP_427095.1 Strain : Rhodospirillum rubrum ATCC 11170 Genome accession: NC_007643 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2320063 - 2321928 bp Length : 1866 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGACTGCGCCGTTTTTATCCTCCCTATCCCCCACCAGTCCGCTGGCCAGCGCCACGGCGCCCTTTCCCGGCTCGCGCAA GGTTTATGCCCGCCCGGCCGACGCCCCCCATTTGCGCGTGCCCTTTCGCGAGATCATCCTGTCCGACCCGGGCGAAGCCC CGGTGCGGGTGGCCGACCCTTCGGGCCCCTATAGCGATCCCGAGGCGACGATCGATCTGCGCCAGGGATTGGCCCGCCAT CGGGCGTCTTGGGCCAGCGCCCGGGGCAATTCCACGGTCACGGCCGGCCGCCCCGCCCCGAGTGAAGGCGATTTCGAGGC CTTTCCCCTGACCTACGCCCCCTTGCGCCGCCGCGATGAGACCCCCTTCACCCAACTGGAATACGCCCGCGCCGGAGTGA TCACCGACGAGATGATCTATGTGGCGACGCGGGAGAACCTGGGCCGGGACAGCGCCGTGGCCGGGGCCTGCGCGCGGTTG GCGGGCGGCGAGGCCTTTGGCGCCGCCCTGCCCGCCCATGTCACGCCCGAGTTCGTCCGCGCCGAGATCGCCGCCGGGCG GGCGATCATCCCGGCCAACATCAACCATCCCGAGCTTGAACCGACGATCATCGGCCGCAACTTCCTGGTCAAGGTCAACG CCAATATCGGCAATTCGGCCCTGGGATCGTCGATCGAGGACGAGGTGGCAAAGCTGGTCTGGGCCATCCGCTGGGGGGCC GACACGGTGATGGATCTGTCGACGGGCAAGGCCATCCACGCCACCCGCGAATGGATCTTGCGCAACAGTCCGGTGCCCAT CGGCACCGTTCCCCTGTATCAGGCTTTGGAAAAGGTGGGCGGCGACGCCACCCGCCTTGACTGGGCGGTGTTCGAAGACA CCCTGATCGAACAATGCGAACAGGGCGTTGATTATTTCACCATCCATGCCGGGGTGCGGCTGGCCCATATTCCGCTGACC GCGTCGCGCACCACCGGCATCGTCAGTCGCGGCGGTTCGATCCTGGCCAAATGGTGCTTGTCCCACCACCGCGAGAATTT CCTTTATGAGCGCTTCGCCGATATCTGCGCCATCCTGCGCCGCTATGACGTGGCCTTTTCGCTAGGCGACGGCCTGCGCC CGGGATCGGTGGCCGATGCCAATGACGCCGCCCAATTCGCCGAACTCGACACTTTGGGCGCCTTGACGGCGGTGGCCTGG GAGCACGGCTGTCAGGTGATGGTCGAAGGCCCGGGCCATGTGCCCATGCACAAGATCAAGGCCAATATGGACCGCCAACT CGCCACCTGCGGCGAGGCGCCGTTCTATACCCTGGGGCCCTTGACCACCGATATCGCGCCCGGCCACGACCACATCACCT CGGCGATCGGCGCGGCGATGATCGGCTGGTTCGGCACCGCCATGCTGTGCTACGTCACCCCCAAGGAACACCTGGGGCTG CCCGATCGCGCCGACGTCAAGGCCGGGGTGATCGCCTATAAGCTGGCCGCCCATGCCGCCGATATCGCCAAGGGGCATCC CGCCGCCCAGCTGCGCGACGACGCCATCAGCAGGGCGCGCTTCGATTTCCGCTGGAGCGACCAGTTCAACCTCGGCCTCG ATCCCGAAGGCGCGCGGGCCTTCCACGACGAAACCCTGCCCCATGCCGCCCATAAGACGGCGCATTTCTGTTCGATGTGC GGGCCGAAGTTCTGTTCGATGAAGATCAGCCATGATATCCGCGACGGCGCCCTCGAGGGGGCGGACGCCCTGACCCAGGC CGGACTGGACCAGATGAGTGCGACCTTCCGCGCCAGCGGCGGCGAGGTCCACCTTGATGCGCAAGCTCTCGACGCCCTCG CCTGGGAGGGGAAACCCGCGCGATAA Protein sequence : MTAPFLSSLSPTSPLASATAPFPGSRKVYARPADAPHLRVPFREIILSDPGEAPVRVADPSGPYSDPEATIDLRQGLARH RASWASARGNSTVTAGRPAPSEGDFEAFPLTYAPLRRRDETPFTQLEYARAGVITDEMIYVATRENLGRDSAVAGACARL AGGEAFGAALPAHVTPEFVRAEIAAGRAIIPANINHPELEPTIIGRNFLVKVNANIGNSALGSSIEDEVAKLVWAIRWGA DTVMDLSTGKAIHATREWILRNSPVPIGTVPLYQALEKVGGDATRLDWAVFEDTLIEQCEQGVDYFTIHAGVRLAHIPLT ASRTTGIVSRGGSILAKWCLSHHRENFLYERFADICAILRRYDVAFSLGDGLRPGSVADANDAAQFAELDTLGALTAVAW EHGCQVMVEGPGHVPMHKIKANMDRQLATCGEAPFYTLGPLTTDIAPGHDHITSAIGAAMIGWFGTAMLCYVTPKEHLGL PDRADVKAGVIAYKLAAHAADIAKGHPAAQLRDDAISRARFDFRWSDQFNLGLDPEGARAFHDETLPHAAHKTAHFCSMC GPKFCSMKISHDIRDGALEGADALTQAGLDQMSATFRASGGEVHLDAQALDALAWEGKPAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 63 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 63 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-175 | 60 |
