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Name : Rru_A1770 (Rru_A1770) Accession : YP_426857.1 Strain : Rhodospirillum rubrum ATCC 11170 Genome accession: NC_007643 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2062286 - 2063557 bp Length : 1272 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGACCTAAAAGCCATTCGCGAAACTCCCGAGGCCTTCGACCTCGCCCTGGCCCGTCGGCGGCTGGAGCCGCGCTC GGCCCTGGTCCTTGATCTCGATAGCCAGCGTCGCGCCGTTCAGACCGAGTTGAACGATCTGCAGGCGCGACGCAACGAGG CGTCCAAGCGCATCGGCCTGGTCAAGAAGGAGGGCGGCGACGCCCAGGCGTTGGTCGATGAGGTCGCCGGCATCAAGGCG ACGATGGCCGCGTTGGAGGCGCGTCTGGGGGACCTCGATCGCGACCTCGACGGCCATCTGATGGGCCTGCCCAATATCCT GGACGACGGCGTTCCCGAAGGCCCCGACGAAAGCGCCAATGTCGAGGTGCGCCGCTGGGGAACGCCGCGCGCCTTCGAGT TCACCCCGCGTCAGCATTTCGAGATCGGCGAGAGCCTGGGCGGCATGGATTTCGAGGCCGCCGCCCGGCTGTCGGGGGCG CGCTTCGTCGTGCTCAAGGGGCAGATCGCCCGCTTGGAACGCGCCCTTGGCCAGTTCATGCTGGATCTGCACATCACCGA GCATGGCTATCAGGAGGTGCAGACCCCGGTTCTGGTCCGCGCCCCGGCCCTGCAGGGAACCGGCCAGCTGCCCAAATTCG CCGAGGATCTGTTCCGCGTCGAGGGGGATTTCTTCTTGATCCCGACGGCCGAGGTCACCGTGACCAATCTGGTCGCCGGG CAGGTGCTCGCCGCCACGGCCCTGCCGTTGCGCATGACCGCCTTCACCCAGTGCTTCCGCTCGGAAGCCGGGGCGGCGGG CAAGGATACCCGGGGCATGATCCGCCAGCACCAGTTCGAGAAGGTCGAGATGGTGTCGATCGTCCATCCCGACGACTCGG CGGCCGAACTGGAGCGGATGACCGCTTGCGCCGAGGATGTGCTCAAGCGCCTGGAGCTGCCTTATCGGGTGATGGCGCTC TGCGCGGGCGATGTCGGGTTCAGCGCCCGCCAGACCTATGACCTGGAGGTCTGGCTGCCCGGCCAGGACCGCTACCGGGA AATCTCGTCGTGCTCCAACACGGGCGACTTCCAGGCGCGGCGGATGAATGGCCGCTTCAAGGTCGAGGGCGAGAAGGGCA CGCGCTTCGTTCACACGCTCAATGGCTCGGGCGTGGCCGTGGGCCGCTGTCTGGTGGCGGTGCTGGAGAATTATCAGAAC GCCGATGGCACGGTGAGCGTCCCCGAGGCCCTGCGCGGCTATATGGGCGGACTTGAGCGGTTGGGGGACTGA Protein sequence : MHDLKAIRETPEAFDLALARRRLEPRSALVLDLDSQRRAVQTELNDLQARRNEASKRIGLVKKEGGDAQALVDEVAGIKA TMAALEARLGDLDRDLDGHLMGLPNILDDGVPEGPDESANVEVRRWGTPRAFEFTPRQHFEIGESLGGMDFEAAARLSGA RFVVLKGQIARLERALGQFMLDLHITEHGYQEVQTPVLVRAPALQGTGQLPKFAEDLFRVEGDFFLIPTAEVTVTNLVAG QVLAATALPLRMTAFTQCFRSEAGAAGKDTRGMIRQHQFEKVEMVSIVHPDDSAAELERMTACAEDVLKRLELPYRVMAL CAGDVGFSARQTYDLEVWLPGQDRYREISSCSNTGDFQARRMNGRFKVEGEKGTRFVHTLNGSGVAVGRCLVAVLENYQN ADGTVSVPEALRGYMGGLERLGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-93 | 51 |
