Name : Rru_A1728 (Rru_A1728) Accession : YP_426815.1 Strain : Rhodospirillum rubrum ATCC 11170 Genome accession: NC_007643 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : 3.6.1.- Position : 2022753 - 2024864 bp Length : 2112 bp Strand : + Note : - DNA sequence : ATGCGTCCCAGCCTTCTTGATCCTTTGTTCCGGCCGCTGACCTCGCTCAAGGGCGCGGGCAAAACCATGGCGCCGCTGAT CGCCCGGCTGATCGGCGGCGACAAGGTGGTCGATCTGTTGTGGCATCTGCCCAGCGGTCTGGTCGATCGCCGGTTCTCGC CGTTGATCGCCGAGGCCCCCGATGGCGTCGTCGTTACCCTGACGGTGGTGGTCGAGGCCCATCAGGAACCGCCGCCGCGC TCGCCCTCGCCCTATCGGGTGGTCTGCCGCGACGCCAGCGGCTTCGTGACCCTGGTATTCTTCCATGGCCGGGCGCGCTA TCTGAACGATTTGCTACCGGTCGGCGAAACCCGGGTGATCAGCGGCAAGGTCGAACGCTTCGGCGGCGCGCCGCAGATTG TCCATCCCACCCATGTCGTGCCCTTGGCCGAGGCCGAGGCGGTGTGCCGGGTTGAACCGGTCTATCCCTTGAGTGGCGGC GTGGCCGGCAAGGTTCTGGCCCGGTTGATCGCCCAGGCCCTTGATGACATCCCCGATCCCGCCGCCTGGCCCGATGAATG GATCGACGCCCCCCTGAAAGCCCGCGAAGGCTGGCCGGGCTGGATCGACGCCCTGCGCGCCGTTCACGCCCCCGAGGAGG CCGAAGACCTGCGCCCCGACCACCCGGCGCGGCGGCGGCTGGCCTATGACGAATTGCTGGCCACCCAACTCGCCCTGTTG CTGGTGCGGCGGGCGGCGCGCACGGTGCGCGGTCGGCCGATCGTCGGCACCGGCGCCCTGCGCGCCAAGGTGCTGGCGGC GCTGCCCTTCGCCCTGACCGGGGCGCAAAGCCGCTCGCTGGCCGAGATCGACGGCGACATGGCCTCGCCGGCCCGCATGT TGCGCCTGCTGCAGGGCGATGTCGGCAGCGGCAAGACGGTGGTGGCGCTGCTGACCATGCTGACGGCGGTGGAGGCTGGC GCCCAGGCCGCCCTGATGGCGCCGACCGAAATCCTCGCCCGCCAGCACATCGAAACCCTGGCGCCGCTCTGCGCCAGCGC CGGGGTGCGCCTGGGCTTGCTGACCGGGCGCGACAAGGGGCGGGCGCGCGCCGCCCTGCTCGAGGCCCTGGCGGCGGGCG AGATCGATATCCTGGTCGGCACCCACGCCCTGTTCCAAGACGACGTGGTCTTCGCCGCCCTCGCCGTGGTGGTGGTCGAT GAACAGCATCGCTTTGGCGTTCACCAGCGTCTGGCGCTGTCGGACAAGGGCCGGGCGGTCGACGTGTTGGTGATGACCGC CACGCCGATCCCGCGCACCCTGACGCTCACCCATTACGGCGACATGGATATCTCGCGGCTTGATGAAAAGCCGCCGGGGC GGCTTCCCGCCGATACCCGGGTGCTGCCGATCGACCGCCTGGACGACGTGATCGCCGCCGTCGCCCGCGCCATCGACGGC GGGGCCAAGGTCTATTGGGTCTGCCCGCTGATCGAGGACTCGGAAACCGGCGACATGGCCGCCGCCGTCGATCGCCAAGC CCTGCTTGCCGACAGGCTGGGGCCACGCCTCGGCCCCCGGGTCGGCCTTGTCCACGGCCGGATGAAGCCCGGCGAAAAAG ACGCGGTGATGGAGGCCTTTTCCGGGAACGGGCTTGATCTGTTGGTGGCGACGACGGTGATCGAGGTCGGCGTCAATGTG CCAAGCGCCACGGTGATGGTGATCGAACACGCCGAGCGCTTCGGCCTTGCCCAGCTACACCAGTTGCGCGGCCGCATCGG CCGGGGCGGCGGGCGTTCGACCTGCCTGTTGCTCTATGCCCCGCCCTTGGGGGAAACCGCCCGCGCCCGCCTGGAGACCA TGCGCCGCACCGACGACGGCTTCGAGATCGCCGAAGAGGATCTGCGGCTGCGCGGCGCCGGCGAGGTTCTGGGCACCCGC CAAAGCGGCCTGCCGGTCTTCCGGCTGATCGATCCGCTGCTCGCCGAAGACCTGCTCGCCATCGCCCGCAAGCAGGCCGA GGTGATCGTCGAGACCGACCCCGATCTGGCCGGCCCCCATGGCGCGGCGCTGCGCGTTCTGCTGTATCTGTTCGAACGCG ACGCCGCGGTGCGCACGCTGCGCTCTGGTTAA Protein sequence : MRPSLLDPLFRPLTSLKGAGKTMAPLIARLIGGDKVVDLLWHLPSGLVDRRFSPLIAEAPDGVVVTLTVVVEAHQEPPPR SPSPYRVVCRDASGFVTLVFFHGRARYLNDLLPVGETRVISGKVERFGGAPQIVHPTHVVPLAEAEAVCRVEPVYPLSGG VAGKVLARLIAQALDDIPDPAAWPDEWIDAPLKAREGWPGWIDALRAVHAPEEAEDLRPDHPARRRLAYDELLATQLALL LVRRAARTVRGRPIVGTGALRAKVLAALPFALTGAQSRSLAEIDGDMASPARMLRLLQGDVGSGKTVVALLTMLTAVEAG AQAALMAPTEILARQHIETLAPLCASAGVRLGLLTGRDKGRARAALLEALAAGEIDILVGTHALFQDDVVFAALAVVVVD EQHRFGVHQRLALSDKGRAVDVLVMTATPIPRTLTLTHYGDMDISRLDEKPPGRLPADTRVLPIDRLDDVIAAVARAIDG GAKVYWVCPLIEDSETGDMAAAVDRQALLADRLGPRLGPRVGLVHGRMKPGEKDAVMEAFSGNGLDLLVATTVIEVGVNV PSATVMVIEHAERFGLAQLHQLRGRIGRGGGRSTCLLLYAPPLGETARARLETMRRTDDGFEIAEEDLRLRGAGEVLGTR QSGLPVFRLIDPLLAEDLLAIARKQAEVIVETDPDLAGPHGAALRVLLYLFERDAAVRTLRSG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 6e-137 | 56 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Rru_A1728 | YP_426815.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 5e-75 | 44 |