|
Name : Rru_A0134 (Rru_A0134) Accession : YP_425226.1 Strain : Rhodospirillum rubrum ATCC 11170 Genome accession: NC_007643 Putative virulence/resistance : Unknown Product : succinate semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 157179 - 158666 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGCCCGAGGGTACCACGAGGATCGCCGCGCTCGACATCGTGCGTGAGGCCGGTCTGCTCAAGGACAAGGCCTATATCGA CGGCGCCTGGGTCGGCGCCGACGACGGCGGTGATTTCCCCGTGCTCGATCCGGCGACCGGCCGTGAGATCGGCCGCGTTC CCAATATGGGCGCGGCTGAAACCCGCCGGGCCATCGATGCCGCCGCCGCCGCTTGGCCTGCCTGGCGGGCGCGCACCGCC AAGGATCGCGCCGCCGTCTTGCGCCGCTGGTACGGCCTGATCATGGACAACCAGGAAGCCCTGGCCGTGCTGATGACCGC CGAGCAGGGCAAGCCGCTGGGCGAGGCCCGGGGCGAAATCGCCTATGGCGCCAGCTTCGTTGAATGGTTCGCCGAAGAGG GCAAGCGGCTTTACGGCGAGGTCGTGCCCGCCCATGGCACCGACAAGCGCATCCTGACCCTGCGCGAGCCGATCGGCGTG GTCGCCGCCATCACCCCTTGGAACTTCCCCAGCGCCATGATCACCCGCAAGGTGGCCCCGGCCCTGGCGGCGGGCTGTCC GGTGGTGCTCAAGCCGGCCGAGGATACGCCGCTGTCGGCGCTGGCCCTGGTGGAACTGGCCGAGCGGGCCGGCCTGCCCA AGGGGCTGATCAATGTCGTGACCACCCATGAGGCCAAGGCGGTGGGCGGCGAGATGACCGCCAATCCGATCGTGCGCAAG CTGTCGTTCACCGGCTCGACCGAGGTCGGCAAGATCCTGATGGCCCAATGCGCCGGAACGGTGAAGAAGGTCTCGCTTGA ACTGGGCGGCAATGCCCCGTTCATCGTTTTCGACGATGCCGATCTCGAGGCGGCGGTGGCCGGGGCGATCGCCTCGAAGT ACCGCAACGCCGGGCAGACCTGCGTCTGCGCCAACCGGCTTTACGTCCAAGAGGGCATCTACGAGGCCTTCACCGAGAAG CTCAAGGCCAAGGTCGAAGCGATGCGCGTCGGCCCGGCGCTCGAGGGCGATGTTCAGCAGGGGCCGCTGATCAACAAGAA GGGCCTCGACAAGGTCGATGGGTTGGTTCGCGACGCCTTGGACAAAGGGGCGACGGCGGTTCTCGGCGGCAAGGTCCATG CCCTGGGCGGCACCTTCTATGAGCCGACGATCCTGACCGGGGTGACCGCCGCCATGCGGATGGCCACCGAGGAGATCTTC GGGCCGGTGGCGCCGCTCTATCGCTTCTCGACCGAGGCCGAGGCGATCGCTTTGGCCAATGCCACCCGGTTCGGTCTGGC CGCTTATTTCTATACCCGCGATATCGGTCGAGTCTGGCGGGTGGCCGAGGGGCTAGAATACGGCATCGTCGGCATCAACG AGGGGATCATCTCGACCGAATCGGCGCCCTTTGGCGGGGTCAAGGAATCGGGCATCGGCCGCGAAGGCTCGCGCCACGGC ATCGATGACTTCGTCGAGATCAAATATCTGTGCATGGGCGGGATCTGA Protein sequence : MPEGTTRIAALDIVREAGLLKDKAYIDGAWVGADDGGDFPVLDPATGREIGRVPNMGAAETRRAIDAAAAAWPAWRARTA KDRAAVLRRWYGLIMDNQEALAVLMTAEQGKPLGEARGEIAYGASFVEWFAEEGKRLYGEVVPAHGTDKRILTLREPIGV VAAITPWNFPSAMITRKVAPALAAGCPVVLKPAEDTPLSALALVELAERAGLPKGLINVVTTHEAKAVGGEMTANPIVRK LSFTGSTEVGKILMAQCAGTVKKVSLELGGNAPFIVFDDADLEAAVAGAIASKYRNAGQTCVCANRLYVQEGIYEAFTEK LKAKVEAMRVGPALEGDVQQGPLINKKGLDKVDGLVRDALDKGATAVLGGKVHALGGTFYEPTILTGVTAAMRMATEEIF GPVAPLYRFSTEAEAIALANATRFGLAAYFYTRDIGRVWRVAEGLEYGIVGINEGIISTESAPFGGVKESGIGREGSRHG IDDFVEIKYLCMGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-143 | 65 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 4e-78 | 43 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 6e-57 | 41 |
