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Name : xerC (Rru_A1220) Accession : YP_426308.1 Strain : Rhodospirillum rubrum ATCC 11170 Genome accession: NC_007643 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1439943 - 1440935 bp Length : 993 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGGATCGTCCGGATTTACCAGCCGACCCCGCCCCGCACCCCGACGAGGCCGGCGTGGTGCCGGGGCTGTTCCTGCCCTG CGCTAGCGATCTGCGGCCGTCGCTGGTCGCTTGGCTCGGCTGGCTTCAGGGGGAGCGCCGCGCCAGCCGCCATACCCTGG ACGCCTATGGCCGCGATCTGGCGGCCTTTCTGACCTTCTTGCGCGATTACCGGGGCGAGGAGCCGGGTCTGGCCACCCTG GCCTCGCTTGGTCCGGCCGATTTCCGCGCCTATATGGCCGCCCGGCTGACCCAGGGGCTGTCGCGGCCCTCGATGGCCCG CGCCCTGTCGACTTTACGCAATCTCTTCCGCTGGCTCGACCGCGAGGGCGTTTTGCGCAATGGCGCCATCGCCACCATCC GCTCACCGCGCCAACCCCAGGCCGTCCCCAAGGCGCTGAGCGAAAGCGAAGCCCTGGACGCCCTGTCGGTGGCCTCGGAC CTGCAAGACGACCCCTGGCTGGCCAAACGCGATCTCGCGCTGTTCACCTTGCTCTATGGCTGCGGCTTGCGGCTGGGCGA GGCGCTCGATCTTGATCGCGGCGACCTGCCGAGCGGCGAGGTGATGCGGATCACCGGCAAGGGCCGCAAGGAGCGTCTGG TGCCGCTGCTGCCGGTGGTGGTCGAGGCGCTGGCCGATTATCTGGCGGCCTGTCCCTTCGCCGGGGGCCCCGATGATCCG CTGTTCCTGGGCAGTCGCGGCAAGCGGCTTAATCCCGGGGTGGTGCAGCGCCAGATGCGGCGGCTGCGCGGCTTCCTCGG GCTTCCCGAAACCGCCACCCCCCATGCCTTGCGCCACAGCTTCGCCACCCATCTGCTGGCCCAGGGCGGCGATTTGCGGA CCATCCAGGAACTGCTCGGCCACGCCTCGCTCTCGACCACCCAGCGCTACACCAAGGTCGATGCCGGCACCCTGGTCGGC CTGCATGGCGCCACCCACCCCCGCGCCCGCTGA Protein sequence : MDRPDLPADPAPHPDEAGVVPGLFLPCASDLRPSLVAWLGWLQGERRASRHTLDAYGRDLAAFLTFLRDYRGEEPGLATL ASLGPADFRAYMAARLTQGLSRPSMARALSTLRNLFRWLDREGVLRNGAIATIRSPRQPQAVPKALSESEALDALSVASD LQDDPWLAKRDLALFTLLYGCGLRLGEALDLDRGDLPSGEVMRITGKGRKERLVPLLPVVVEALADYLAACPFAGGPDDP LFLGSRGKRLNPGVVQRQMRRLRGFLGLPETATPHALRHSFATHLLAQGGDLRTIQELLGHASLSTTQRYTKVDAGTLVG LHGATHPRAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 8e-28 | 41 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 8e-28 | 41 |
