Gene Information

Name : arcB (MCAP_0090)
Accession : YP_424085.1
Strain : Mycoplasma capricolum ATCC 27343
Genome accession: NC_007633
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase, catabolic
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 107227 - 108222 bp
Length : 996 bp
Strand : +
Note : identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658

DNA sequence :
ATGGCTTTAAATTTAAAAGGTAAAAGTTTTTTAAAATTATTAGATTTTTCTCCAAGAGAAATTAGATATTTACTAGATTT
ATCTAGAGATTTGAAAAGAGCAAAGTATGCTGGTAATGAAGTTCAAACAATGCAAGGAAAAAACGTTGTTTTACTATTTC
AAAAAGATTCAACTAGAACTAGATGTGCTTTTGAAGTAGCAGCATTAGATCAAGGTGCTCACGTTACTTATTTAGGACCA
TCAGGATCTCAATTTGGTAAAAAAGAATCAGTAGCAGATACTGCAAAAGTTTTAGGTAGAATGTATGATGCTATTGAATT
TAGAGGATATGAGCAAAGTGTTGTTGAAGATCTTGCAAAATATTCAGGAGTTCCAGTTTATAATGGATTAACTAATGAAT
TTCACCCAACTCAAATTCTTGCAGATTTTTTAACAGTTGAAGAATATAAAGGTAATCTAAAAGGTCTAAAATTTGTTTTT
GCAGGAGATACTAGAAATAACGTAGCAACTTCATTAATGGTTGGTTGTGCAAAAATGGGAATGCACTTTGTGGGAGCTGC
TCCAAAAGAATTATGACCAAGTGAAGATTTAGTAAATCAATCTAAAGAAATTGCAAAAGAAACAAATGCTACAATTTCAT
TTGTTGAAGACATGAAACAAGCATGTAGTGATGCTGATGTAATTTATACTGATGTATGAGTTTCAATGGGTGAACCAGCT
GAAGTATGAGAATCACGTATTAACTTATTAAAACCATTCCAAGTTAATATGGATGCAATTAAAGTTGCTAAGCCTGATGT
AATTTTTATGCACTGTTTACCATCATTTCATGATTTAAACACTGAAGTTGGAAGACAAATTTATGAAAAATTTGGAATTC
CTGAAATGGAAGTGACAAATGAAGTATTTGAATCTAAACACTCAGTTGTTTTTGAAGAAGCTGAAAATAGACTTCATACA
ATTAAAGCTGTTATGGTTGCAACAATAGGCAAATAA

Protein sequence :
MALNLKGKSFLKLLDFSPREIRYLLDLSRDLKRAKYAGNEVQTMQGKNVVLLFQKDSTRTRCAFEVAALDQGAHVTYLGP
SGSQFGKKESVADTAKVLGRMYDAIEFRGYEQSVVEDLAKYSGVPVYNGLTNEFHPTQILADFLTVEEYKGNLKGLKFVF
AGDTRNNVATSLMVGCAKMGMHFVGAAPKELWPSEDLVNQSKEIAKETNATISFVEDMKQACSDADVIYTDVWVSMGEPA
EVWESRINLLKPFQVNMDAIKVAKPDVIFMHCLPSFHDLNTEVGRQIYEKFGIPEMEVTNEVFESKHSVVFEEAENRLHT
IKAVMVATIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 5e-99 64
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 8e-100 63
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-100 63
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-100 63
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-100 63
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-100 63
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-100 63