Gene Information

Name : ssb (MCAP_0025)
Accession : YP_424023.1
Strain : Mycoplasma capricolum ATCC 27343
Genome accession: NC_007633
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 29212 - 29652 bp
Length : 441 bp
Strand : +
Note : identified by similarity to SP:P37455; match to protein family HMM PF00436; match to protein family HMM PF01336; match to protein family HMM TIGR00621

DNA sequence :
ATGAATAGAGTAAATTTGGTAGGTAGAATTACACGAGATTTAGAACTAAGAGTAGCAAAAAATGGATCTAAGTTTGTCTT
TTTTACAGTTGCTGTTTCTGAATATTCAAGTAGAGAAGAAAAGACTAATTTTATACCCTGTTCTGCATTTGATAGAACTG
CTGAAAATATGGTTAAATTTTTGTCAAAAGGTAGTTTAATTTCAGTTGAAGGAAGAATTACAACTAGAAATAATCAAACA
CCTGATGGTAGATTTGAAACTATTGTAAATGTACTAGCTGAAAGAGTTAATTTCTTAGAACCAGCTAAAAGCAGAAATGC
TTTAATGACTGAAGAAAACGATAATTTATCACCTAGCCAACCTACTCAAGAAAATAGCGATTCATCATTTGACGATTTAG
TAGTTTCTGATGATGATGAACTTTCAATTTTATGAGAATAA

Protein sequence :
MNRVNLVGRITRDLELRVAKNGSKFVFFTVAVSEYSSREEKTNFIPCSAFDRTAENMVKFLSKGSLISVEGRITTRNNQT
PDGRFETIVNVLAERVNFLEPAKSRNALMTEENDNLSPSQPTQENSDSSFDDLVVSDDDELSILWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-13 43
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-13 43
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-13 42
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-15 41
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 4e-15 41