Gene Information

Name : amb3929 (amb3929)
Accession : YP_423292.1
Strain : Magnetospirillum magneticum AMB-1
Genome accession: NC_007626
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4340845 - 4341771 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGTCCCCTTCGACCGACACATCGAGTCCTTTCTCGAGATGATGCAGGTCGAACGGGGCGCCAGCCCCAACACCCT
GGATGCCTATGGCCGCGACTTGGCGGATTTCGCCGAATTCCTGGACGGGCGCGGGTTCAGCCCACTGAGGGCCGACGCCC
GGGCGGTCGCCGCCTATATCGCCCGTCAGGCCGAGATCGGCATGGCGGCCCGCACCCAGGCGCGCCGCCTGTCCTGCCTG
AAGCAGTTCTACGGCTTCGTCTTCGCCGAGCGCCTGCGCCCCGACGACCCCACCGCCAATATCGACGCGCCGCGCCTGGG
CCGCCCCCTGCCCAAATATCTGCGCCGCGAGGAGGTGACGGCGCTGCTGGACGCCGCCCGCGCCCTGGAGGGCAGCGACG
GCATCCTGATGACCGCCCTGCTGGAGACCCTCTACGCCGCCGGGCTGCGCGTTTCGGAACTGGTCTCCCTGCCGCTCTCC
GCCGTGGCCCGCGACCCCTCGGTGCTGGTGGTGCGCGGCAAGGGATCGAAGGAGCGCATGGTGCCGCTGTCCGATCCGGC
CCGTGCCGCCCTGCTGGCCTGGAAGGTCGAGCGCCAGACCCTGGTGCCCAAGTCCAAGCCGTCGCGCTGGCTGTTCCCGT
CCTCGGGCGCCCTGGGCCACCTGACTCGGTCGGGCTTCGCCAAGATGCTGGGCCGCGTCGCCGTCCTGGCCGGTCTGGAC
CCCGCCAAGGTGTCGCCCCACGTGCTGCGCCATTCCTTCGCCAGCCACCTGCTGGCCGGGGGCGCCGATCTCCGCAGCGT
GCAGGAGATGCTGGGCCATGCCGACATCGCCACCACCGAGATCTACACCCATCTGATCGACGACGAAGCCGGCCGTCTGG
TCCGCGCCCACCACCCGCTTGCCGCCAAGCCGGGAACCAAGCCCTAA

Protein sequence :
MSVPFDRHIESFLEMMQVERGASPNTLDAYGRDLADFAEFLDGRGFSPLRADARAVAAYIARQAEIGMAARTQARRLSCL
KQFYGFVFAERLRPDDPTANIDAPRLGRPLPKYLRREEVTALLDAARALEGSDGILMTALLETLYAAGLRVSELVSLPLS
AVARDPSVLVVRGKGSKERMVPLSDPARAALLAWKVERQTLVPKSKPSRWLFPSSGALGHLTRSGFAKMLGRVAVLAGLD
PAKVSPHVLRHSFASHLLAGGADLRSVQEMLGHADIATTEIYTHLIDDEAGRLVRAHHPLAAKPGTKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-33 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-33 42