Gene Information

Name : amb3876 (amb3876)
Accession : YP_423239.1
Strain : Magnetospirillum magneticum AMB-1
Genome accession: NC_007626
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 4282566 - 4283120 bp
Length : 555 bp
Strand : -
Note : -

DNA sequence : 
ATGGGTGCACCTGGGGCAAAGTCGAGCCCTTCCAATAACAAGATCAGAGGTTCCGCCATGGCCGCCATCACCCTCAAGGG
CAATCCCATCAACACCAACGGCACCTTGCCGGCGGTCGGGGCCGCTGCCCCCGCCTTCTCGCTGACCACCGTCGATCTGG
CCGATATCGGCCTGGATTCCGTGGCGGGCAAGACCGTGGTTCTGAACATTTTCCCCAGCATCGACACGCCGGTCTGCGCC
GCCTCGGTGCGCCGCTTCAATGCCGAGCTGGACAAGCTGGGCAGCGTCGCCGTGCTGTGCGTTTCCGCCGACCTGCCCTT
CGCCCACAAGCGCTTCTGCGGCGCCGAGGGCCTGGAGCGGGTCCAGTCCCTGTCCGACATGCGCGACAAGGGCTTCGGCG
AGCGCTATGGCGTCAAGATCGTCGACGGCCCCCTGGCCGGTCTGCTGGCCCGCGCCGTGGTGGTGATCAAGGGCGGCAAG
GTGGCCTATGCCGAGTTGGTCCCCGAGATCGCCCAGGAGCCCAATTACGACGCCGCCATCGCCGCCGCGAAGTAA

Protein sequence : 
MGAPGAKSSPSNNKIRGSAMAAITLKGNPINTNGTLPAVGAAAPAFSLTTVDLADIGLDSVAGKTVVLNIFPSIDTPVCA
ASVRRFNAELDKLGSVAVLCVSADLPFAHKRFCGAEGLERVQSLSDMRDKGFGERYGVKIVDGPLAGLLARAVVVIKGGK
VAYAELVPEIAQEPNYDAAIAAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 7e-32 44
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-31 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-31 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-32 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amb3876 YP_423239.1 peroxiredoxin VFG0087 Protein 3e-32 44