Gene Information

Name : amb3316 (amb3316)
Accession : YP_422679.1
Strain : Magnetospirillum magneticum AMB-1
Genome accession: NC_007626
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3600238 - 3600501 bp
Length : 264 bp
Strand : +
Note : ISmag9,orf1; similar to IS1 family

DNA sequence :
ATGAAGAAGAGCCGTTTCACGGATGCCCAGATCATGGCGATCCTGCGCCAGGCGGAGGACGGCATCCCGGTGCTCAACCT
GTGCCGCGAGCACCAGATGAGTAGCGCGACCTTTTACAAATGGCGGGCCAAGTACGGGGGCATGGACGCATCCATGATCT
CGGAGATGAAGGGCCTTGAGGACGAGAACCGGCGGCTAAAGAAGATGTTCGCCGAGCTCAGCCTGCAGAACGAGTTGTTG
CGCGAGGCCCTTGGAAAAAAATAG

Protein sequence :
MKKSRFTDAQIMAILRQAEDGIPVLNLCREHQMSSATFYKWRAKYGGMDASMISEMKGLEDENRRLKKMFAELSLQNELL
REALGKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 6e-17 54
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 6e-17 54
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 3e-21 53
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 1e-16 52
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 1e-16 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-17 49
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-17 49