Gene Information

Name : amb3286 (amb3286)
Accession : YP_422649.1
Strain : Magnetospirillum magneticum AMB-1
Genome accession: NC_007626
Putative virulence/resistance : Virulence
Product : anaerobic dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 3561984 - 3564908 bp
Length : 2925 bp
Strand : -
Note : -

DNA sequence :
ATGACCGTCGGCCCCGACGGCAAGCTGCAGCTCAATCCCGACCAGCAGGTCAGCTACACCATGTGCCTGGGCTGCACCAC
CCAATGCGGCGTGCGGGTCCGGGTGGACAAGGCGAGCCAGACGGTGGTGCGGGTGGCGGGCAATCCCTACAGCCCGCTGT
CGGCCGACCCCCACCTGCCCATGGGCGTGCCGGTGCGCAAGAGCTTCCAGCATCTGTCGCGCTTCGAGGAGAAGGGCCTT
GCGGGCCGCTCCACCGCCTGCGGGCGCGGCAATGCCGTGCTGGAACAGATGAACTCGCCCTTCCGCGTCACCCGGCCCAT
GAAGCGGGTGGGGCCGCGCAATTCCGGCCGGTGGGAGCCCATCTCCTTCGAGCAACTGGTCAAGGAGGTGGTCTTCGGCG
GCGACCTGTTCGGCGAGGGCAGGGTGGCCGGGCTGGCCGAGCTGCGCAGCTTCGAGCCCATCGACCCGGCCCAGCCCGAA
TTGGGGCCGAAGGTCAATCAGGTGGCCATGCTGACCTCGGTCAATGACGGCCGCGAGAACTTCGTGCGCCGCTTCGTGCA
GCAATCCTACGGCTCCATCAACATGGTGGGGCATGGCTCCTATTGCGGCGGCTCGTACCGCTCGGGCTCGGGGGCGGCGT
TCGGCGACACCAAGCAGATGCCCCACGCCAAGCCCGACCTGCAGAACGCCGAGTTCATCATCTTCGTCGGCACCGCCCCG
GCCAATGCCGGCAATCCCTTCAAGCGCCAGGGCACCTTGCTGGCCCGCGCCCGCACCGAGGGCAAGCTGAACTACGTGGT
GGTCGATCCGGTGCTGACCCATGCCGACAACATGGTGGCGCAAGAGCGCAGCCGCTGGATTCCCATCCGGCCGGGCACCG
ATGGCGCCCTGGCCCTGGCCATGATCCGCTGGATCATCGAGAACGAGCGCTTTGACGCCGCCTTCCTGGCCCAGCCCAAT
CAGGCGGTGGCCGAAGCGGCCGGCGAGGCGGCGTGGTGCAACGCCACCCACCTCGTGGTCGCCCAGCCCGGCCATTCGCG
CCAGGGCTTCTTCCTGCGCGGCTCCGACATGGGGCTGCCCGTCCCCGAGGCCGATCGCTACAAGGACGCCGATCCCTTCG
TGGTGCTGGACGGCGAGGGCAAGCCCATCTTCCACGCCAAGGCCACCGGCCCCGCCCGCCTGTTCGTCGACCAGGAGATC
GAGGTGTCGGGCCAGAAGCTGCTGGTGCGCTCCAGCCTGACCCTGCTGCGGCAGGCGGCCGGGAGCCAGAGCATGGCGCA
GTACTCGGACGCCTGCGGCATCCCCCTCGAGGTGATCGTCGGTCTGGCCCGCGAATTCACCAGCCATGGCAAGAAGGCCG
CCATCAATACCCATGGCGGCACCATGGCCGGCAACGGCTTCTACAACGCCTTCGCCCTGGTCAGCCTCAACACCCTGATC
GGCAATCTCAACCGCAAGGGCGGTACCATCATCAACGGCGGCGGCTTCAAGGAGGAGGACGGGCCGCGCTATCAACTGGC
CGGCTTCGAGGGCCAGATCAAGCCGTCGGGCACGCCGCTGGGCCGCAACACGCCCTATGAGAAATCGGCCGAGTTCAAGC
GCAAGAAGGAAAGCGGCGCCAAGCCCTATCCCGCCGAGCAGCCCTGGTACGGCACCGCGCCGCAACTGGCCACCGAATGG
CTGTCGGCGGCGCAGTCGGGCTATCCCTATGGCCTGAAGGCGCTGCTGCTGTGGGCGACCAATCCGGTCTACGGCATTCC
CGGCCTGCGCCCCATCGCCGAGAAGGTGCTGGGCGATCCCAAGGCGATTCCGTTGCTGGTGGCCATGGATTGCTTCATCA
ACGAAACCTCGTCCTTCGCCGACTACATCGTGCCCGACGCCTTCATGTACGAGGGCTGGGGCTTCGTCGCCGCCTGGGGG
GGCGTGCCGACCAAGGCCTTCCTGACGCGCTGGCCGGTGGTCGAGCCCAAGATGGCCAAGACCGCGCAAGGGCAGCCGGG
GGGCATGGAAGCCTTCCTGATCGCCGCCGCCAAGGCCATGGGCCTGCCGGGCTTCGGTGCGGCCGCCATCAAGGACGCCG
AGGGCAATGCCCACCCTCTGGACCGGGCCGAGGATTATTATCTGCGCGCCGCCGCCAATGTCGCCTTCACCGGCAAGGGG
CCGGTTCCCGACGCCAGCGACGACGACATCACACTGACCGGGGTCACGCGCATCATGCCCGACCTGGAAGAGACCCTGAA
GCCCGACGAGGTGCGCAAGACGGCGTTCCTGTTCACGCGCGGCGGCCGCTACCAGCCCGCCGCCGAGGCCTGGGACGACA
AGGAATGGGCCGCCTGGCGCTTCACCAAGCCGCTCAACGTCTATAACGAGGTGGTGGGGACCGCCAAGGATTCCCTGTCG
GGCCAGCGGTTCTCCGGCGTGCCGGTCTGGGCGCCGCCCCGCTTCGCCGACGGGACGCCGGTGCGCCAGACCTATCCCGA
GGCCGAGTGGCCCTTGCAACTGATCAGCTACAAGAGCCCGCTGCAGAACAGCTACTCCATCGCGGCCAACCGCCTGCGCG
GCCTGCATCCGGATAATCCGGTGGCGATCAATCCCGAGGATGCGGCGCGGGCGGGGATCAAGACTGGCGACGCCATCCGC
ATCAGCACGCCCACCGGTTCGGCCTCGGCGGTGGCGGTGGTCCGCCATGGGGTGCGCCAGGGGGTGCTGGCGGTGGAACA
CGGGTTCGGGCACCGCGAACTGGGCGCCCGGGCCCATCGGATCGGCGATGAGGTGCAGCCCTCCGTTCCCGGCATCGATG
CCGGAATCGCCCTGAACGACCTCGGCCTGATCGATCCCACCCGCAAGGCCAGGGCGCCTTTCGTCGACCCGGTCTCGGGA
ACGGCGGTTCGTCAGGCCATTCCGGCCAGACTGGCCAAAGCCTGA

Protein sequence :
MTVGPDGKLQLNPDQQVSYTMCLGCTTQCGVRVRVDKASQTVVRVAGNPYSPLSADPHLPMGVPVRKSFQHLSRFEEKGL
AGRSTACGRGNAVLEQMNSPFRVTRPMKRVGPRNSGRWEPISFEQLVKEVVFGGDLFGEGRVAGLAELRSFEPIDPAQPE
LGPKVNQVAMLTSVNDGRENFVRRFVQQSYGSINMVGHGSYCGGSYRSGSGAAFGDTKQMPHAKPDLQNAEFIIFVGTAP
ANAGNPFKRQGTLLARARTEGKLNYVVVDPVLTHADNMVAQERSRWIPIRPGTDGALALAMIRWIIENERFDAAFLAQPN
QAVAEAAGEAAWCNATHLVVAQPGHSRQGFFLRGSDMGLPVPEADRYKDADPFVVLDGEGKPIFHAKATGPARLFVDQEI
EVSGQKLLVRSSLTLLRQAAGSQSMAQYSDACGIPLEVIVGLAREFTSHGKKAAINTHGGTMAGNGFYNAFALVSLNTLI
GNLNRKGGTIINGGGFKEEDGPRYQLAGFEGQIKPSGTPLGRNTPYEKSAEFKRKKESGAKPYPAEQPWYGTAPQLATEW
LSAAQSGYPYGLKALLLWATNPVYGIPGLRPIAEKVLGDPKAIPLLVAMDCFINETSSFADYIVPDAFMYEGWGFVAAWG
GVPTKAFLTRWPVVEPKMAKTAQGQPGGMEAFLIAAAKAMGLPGFGAAAIKDAEGNAHPLDRAEDYYLRAAANVAFTGKG
PVPDASDDDITLTGVTRIMPDLEETLKPDEVRKTAFLFTRGGRYQPAAEAWDDKEWAAWRFTKPLNVYNEVVGTAKDSLS
GQRFSGVPVWAPPRFADGTPVRQTYPEAEWPLQLISYKSPLQNSYSIAANRLRGLHPDNPVAINPEDAARAGIKTGDAIR
ISTPTGSASAVAVVRHGVRQGVLAVEHGFGHRELGARAHRIGDEVQPSVPGIDAGIALNDLGLIDPTRKARAPFVDPVSG
TAVRQAIPARLAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 48
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 48
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 48
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 48
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amb3286 YP_422649.1 anaerobic dehydrogenase VFG0484 Protein 0.0 48