Gene Information

Name : amb2895 (amb2895)
Accession : YP_422258.1
Strain : Magnetospirillum magneticum AMB-1
Genome accession: NC_007626
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3093414 - 3094091 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATCCTTCTGATCGAGGACGACAGTGAAGCGGCGGCCTACATGGCCAAGGGCCTGCGCGAGGCCGGGCATGTGGT
CGATCACGCCGCCACCGGGACCGACGGGCTGTTCCTGGCCACCTCCGAGCGCTGGGACGCCATGATTATCGACCGCATGC
TGCCCGGCCTGGACGGGCTGGCCATCATCCAGGCGCTGCGCGCCGCCGGCAACACCACGCCGGTGCTGGTGCTGTCCGCC
CTGGGCAAGGTGGACGACCGGGTGCGCGGCCTGAAGGCGGGCGGCGACGATTATCTGGTCAAGCCCTATGCCTTCGCCGA
ATTGCTGGCCCGCATCGAGGCCCTGTCGCGCCGGGTGTCCAGCACCCAGCCCGAGACCCGCCTCAAGGTCGAGGACCTGG
AGATGGATCTGCTGGCCCGCACCGTGACCCGGGGCGGCCAGGAGATCGACCTGCAGCCGCGCGAATTCCGCCTGCTGGAA
TACCTCATGCGCCATGGCGGCCAGGTGGTGACCCGCACCATGCTGCTGGAGAATGTCTGGGAATACCATTTCGACCCGCA
GACCAATCTGATCGACGTGCATATCAGCCGGTTGCGCCAGAAGGTGGACAAGGATTTCGAACTGCCGCTGATCCATACGG
TTCGCGGCGCCGGATACACCCTTCGTGCGGCCCGCTAG

Protein sequence : 
MRILLIEDDSEAAAYMAKGLREAGHVVDHAATGTDGLFLATSERWDAMIIDRMLPGLDGLAIIQALRAAGNTTPVLVLSA
LGKVDDRVRGLKAGGDDYLVKPYAFAELLARIEALSRRVSSTQPETRLKVEDLEMDLLARTVTRGGQEIDLQPREFRLLE
YLMRHGGQVVTRTMLLENVWEYHFDPQTNLIDVHISRLRQKVDKDFELPLIHTVRGAGYTLRAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-44 50
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-43 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amb2895 YP_422258.1 response regulator BAC0125 Protein 1e-51 52
amb2895 YP_422258.1 response regulator BAC0083 Protein 6e-53 52
amb2895 YP_422258.1 response regulator BAC0347 Protein 9e-52 50
amb2895 YP_422258.1 response regulator BAC0111 Protein 6e-54 49
amb2895 YP_422258.1 response regulator BAC0638 Protein 5e-46 49
amb2895 YP_422258.1 response regulator BAC0308 Protein 3e-45 47
amb2895 YP_422258.1 response regulator BAC0197 Protein 2e-44 46
amb2895 YP_422258.1 response regulator AE000516.2.gene3505. Protein 4e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
amb2895 YP_422258.1 response regulator VFG0596 Protein 7e-45 50
amb2895 YP_422258.1 response regulator VFG1389 Protein 2e-38 46
amb2895 YP_422258.1 response regulator VFG1390 Protein 6e-41 43