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Name : amb2521 (amb2521) Accession : YP_421884.1 Strain : Magnetospirillum magneticum AMB-1 Genome accession: NC_007626 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2702881 - 2704149 bp Length : 1269 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCATGACCTCAAGTCCATTCGCGACAACCCGGACGGATTCGATGCGGGACTGAAGCGCCGGGGCCTCGAGCCCAAGGC CGCCGCCATCCTCGACCTGGACACGCGGCGCCGCGCCGCCCAGACCGCCTTCCAGGAAATGCAGGCCCGGCGCAACGACG CCTCCAAGCAGATCGGCGCCCTCAAGAAGAGCGGCGGCGACGCTTCCGCCCTGATGGACGAGGTGGCGAGCCTGAAGGAG CGCATGCCGGCGGCCGAGGAAGAGGACAAGGCGCTGGGCGCCGAGATCGAGTCCATCCTGGCCTCCATTCCCAATCTGCC GGCGTCCGATGTGCCGGACGGTCCCGACGAGGACCATAACGTCGAATTGCGCAAGTGGGGCACGCCCAAGAGCTTCGCCT TCACCGCGCTGGACCACGACGCCATCGGCGCCAAGCTGGGCCTGATGGATTTCGACGGCGCCGCCAAGCTGTCGGGGGCC CGCTTCGTCGTATTGAAGGGCCAGTTGGCCCGGCTGCAACGCGCCATCGGCCAGTTCATGCTGGATTTGCAGACGGTCGA GCACGGCTACACCGAGATGGACCCGCCGCTGATGGTCAAGGACGGTGCCGCCTTCGGCACCGGCCAATTGCCCAAGTTCG GCGAGGATCTGTTCAAGACCAATACCGGCCACTGGTTGATTCCCACCGCTGAGGTGCCGCTGACCAATCTGGTCAGCGAC GAGATCCTGGACGAGAAGGCGCTGCCGCTGCGCATGACCGCTCTCACGCCGTGTTTCCGCTCGGAAGCCGGGGCGGCGGG CAAGGACACCCGCGGCATGATCCGCCAGCACCAGTTCCACAAGGTGGAGATGGTCTCCATCGCCCATCCCGATGCCTCCG GCGCCGAGCACGAGCGCATGACCCAATGCGCCGAGACGGTGCTGCAGCGCCTGGGGCTGGCCTATCGCGTCATCGTGCTG TGCACCGGCGACATGGGCTTTTCGGCGCAGAAGACTTATGACATCGAAGTCTGGCTGCCGGGCCAGCAGCGCTACCGGGA AATCTCGTCCTGCTCTAATTGCGGCGACTTCCAGGCCCGGCGCATGAAGGCCCGCTTCCGCCCCGAGGGCGAGAAGGGGA CGCGCTTCGTCCATACCCTGAACGGCTCGGGCCTCGCCGTGGGTCGCACCCTGATCGCCGTGATGGAAAACTATCAGCGC GAGGACGGCACCATCGAGGTGCCCGAGGCGCTGCGCCCCTATATGGGCGGTCTGGAGGTCATCGGCTGA Protein sequence : MHDLKSIRDNPDGFDAGLKRRGLEPKAAAILDLDTRRRAAQTAFQEMQARRNDASKQIGALKKSGGDASALMDEVASLKE RMPAAEEEDKALGAEIESILASIPNLPASDVPDGPDEDHNVELRKWGTPKSFAFTALDHDAIGAKLGLMDFDGAAKLSGA RFVVLKGQLARLQRAIGQFMLDLQTVEHGYTEMDPPLMVKDGAAFGTGQLPKFGEDLFKTNTGHWLIPTAEVPLTNLVSD EILDEKALPLRMTALTPCFRSEAGAAGKDTRGMIRQHQFHKVEMVSIAHPDASGAEHERMTQCAETVLQRLGLAYRVIVL CTGDMGFSAQKTYDIEVWLPGQQRYREISSCSNCGDFQARRMKARFRPEGEKGTRFVHTLNGSGLAVGRTLIAVMENYQR EDGTIEVPEALRPYMGGLEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-100 | 51 |
