|
Name : amb0144 (amb0144) Accession : YP_419507.1 Strain : Magnetospirillum magneticum AMB-1 Genome accession: NC_007626 Putative virulence/resistance : Virulence Product : UDP-N-acetyl-D-mannosaminuronate dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 166520 - 167797 bp Length : 1278 bp Strand : - Note : - DNA sequence : TTGTTCATGTCCACCCCGTCGTCGCGGATCGCCGTCATCGGCCTGGGCTATGTCGGCCTGCCGCTGGCCGTGGCCATCGC CCGCCACTTCCCCACCATCGGGTTCGACATCGACCAGGGCCGCGTCGCCGAGCTGCACAAGGGCCTGGACCGTACCGGCG AGGTGGAGACCGCCCGTCTGCGAGCCAGCACCATGCGCCTGTCGGCCAAGGCCGACGACATCGCTGGCCAGGACGTCTAC ATCGTCACGGTGCCCACCCCGGTGGACAGCGGCAATTACCCCGACCTCAAGCCGGTGCTGTCGGCCTGCCGCACGGTGGG CAGGGCCATGAAGAACGGCGCGGTCGTGGTGTTTGAAAGCACCGTCTATCCCGGCGTCACCGAGGATATCTGCGGCCCCG AGCTGGAAAAGTACTCGGGGCTCAAATGCGGCACCGACTTCTTCCTGGGCTACAGCCCCGAGCGCATCAATCCCGGCGAC CGCGAACACACCGTGGACCGCATCACCAAAGTGATCGCCGGCCAGACCCCCGAGGTGACGGCACTGCTGGCCCGGATCTA CGGCTCGGTGACCACGGGGGGCGTGTTCCCCGCCGCCTCGATCCGGGTGGCCGAGGCCGCCAAGGTGATCGAGAACGCCC AACGCGACATCAACATCGCCTTCATCAACGAAATCACCATGATCTTCCAGAAGCTGGGGATTTCGGTCTACGACGTTCTG GACGCCTCGTCCACCAAGTGGAACTTCCTCAATTTCAAGCCGGGTCTGGTGGGCGGCCACTGCATCGGCGTCGATCCCTT CTATCTGGCCCAATGCGCCCAGGACAACGGCCATCACCCCGAGATCATCCTGTCGGGGCGGCGCATCAACGACGGCATGG GCGAGTGGATCGCGGAACGGGTGTCAGCCCAGCTTTCCGGTCCGTCGCGCATTCTGGTCCTGGGCCTGACCTTCAAGGAA AACGTCCCCGACCTCAGGAATTCCAAGGTGGTCGACGTGATCCGCGCCCTTCGCGCCCGGGGGCACTCGGTAGATGTTCA CGACCCCTTCGCCGACCCGGCCGAGGCGGAGCACGAATATTCCGAGACCCTGATGCCCAGCCTGGACGGCGCCGCCGGTT ATGACTGCCTGCTGGGCGCCGTGCCGCATCAGCCCTATGTGGCCTTTTCAGGCGAGAGCTTCACCACCCTGGTCCGTCCC GACGGGCTGGTGGCCGACGTCAAGGGCATGTGGCGCGGCATGGATATCCCGCAGTCACTCCGCCTGTGGCGGCTGTAG Protein sequence : MFMSTPSSRIAVIGLGYVGLPLAVAIARHFPTIGFDIDQGRVAELHKGLDRTGEVETARLRASTMRLSAKADDIAGQDVY IVTVPTPVDSGNYPDLKPVLSACRTVGRAMKNGAVVVFESTVYPGVTEDICGPELEKYSGLKCGTDFFLGYSPERINPGD REHTVDRITKVIAGQTPEVTALLARIYGSVTTGGVFPAASIRVAEAAKVIENAQRDINIAFINEITMIFQKLGISVYDVL DASSTKWNFLNFKPGLVGGHCIGVDPFYLAQCAQDNGHHPEIILSGRRINDGMGEWIAERVSAQLSGPSRILVLGLTFKE NVPDLRNSKVVDVIRALRARGHSVDVHDPFADPAEAEHEYSETLMPSLDGAAGYDCLLGAVPHQPYVAFSGESFTTLVRP DGLVADVKGMWRGMDIPQSLRLWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-102 | 52 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-84 | 43 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-84 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| amb0144 | YP_419507.1 | UDP-N-acetyl-D-mannosaminuronate dehydrogenase | VFG0431 | Protein | 7e-85 | 43 |
