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Name : amb0099 (amb0099) Accession : YP_419462.1 Strain : Magnetospirillum magneticum AMB-1 Genome accession: NC_007626 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 112551 - 114548 bp Length : 1998 bp Strand : + Note : - DNA sequence : TTGACCCTGCCGCCACTCTCCCTTAATCAGAGGCGTTCGGCGCCCGGCAGCTGTCGGGTATTCCGGGGCCGGGTATTCCG GGGAATGTGGACGTCCATGAAACTGCCGCCGCTGTCGCGCGCCTATCTGGCTTTCGCTCACGATGTGTCCATGGCGGCGC TGTCCTTCGTCATGGCGCTCTATCTTCGGCTCGGCGATGACACCTGGATCTGGTGGGACCGTCTCGATCTGGGCCTGGCC ACTGCCCTGTTCACCCTGGTCGCCGCCTCGGTCTTTCTGTCGCAGCGGCTCTATCGCGGTGTCTGGCGGTATGCCTCGGT CAACGACCTGGTGGCGCTGACCCGGGCGGCGACACTGACCATCCTGGTCTTTCTCGCCCTGCTGTTCCTGACCACCCGGC TGCAGGCCCTGCCGCGCTCGGTGCTGCTGATCAATTGGTTCGTGCTGCTGGCCCTGCTGGGCGGGCCGCGCTTCATCTAC AGAACCTTCAAGGATCACCATCGCAACCGCCGCCGCGCCCAGGGCGACCATGTGCGGGTGCCGGTCTTGCTGGTGGGGGC CGGCGACGAGGCCGAGCTGTTCATCCGTGCCGCCCATTCCCCCGACGCGGAATACCGGGCGGTGGGTCTGCTCAGCTCGC GCGGGGCGCGGGTGGGCCGTCATATCCACGGCATCGACGTTCTGGGCTCCACCGACGAGATGGGCGAGGTGGTGGCGGCG CTGAAGGCCAAGGGTCAGGCTCCGCAGCGTCTGGTCATCACCGACCATCGCCTGGACGGGTCCGAGGTGCGGCAGTTGCT CGACGACGCCGACCGCCTGGGCATGACCTTGGCCCGCATTCCCAGGATGATGGACCTGAAGGATGGGGTGGAGGAGCGCG TCACCATGCGCCCCATCGCCGTCGAAGACCTGCTGGGCCGTCCCCAGGCAGTTCTCGATCGCGTCTCCATGGAATCCATG ATCAAGGGCCGCCGCGTGCTGGTCACCGGCGCCGGCGGGTCCATCGGCAGCGAGCTGGTGCGCCAGATCAGCGATTTCGG CCCGGCCTCGCTGGTGCTGTTCGAGGCCTGCGAGTTCAACCTCTATGCCATCGACCAGGAGATTTCCCTGCGCCAGCCGG GCATGGAGCTGGTGCCGCTGCTGGGTGACGTGCGCGATCCGGTGCGGGTGGGCGAGGCCATGGCGCGCTACCGGCCCGAT CTGGTGTTCCACGCCGCTGCCCTCAAGCATGTGCCCATGGTCGAGTACAATCCCGACGAAGGCATCCTGACCAATTGCGT CGGCACCCGTCTGGTGGCCGATGCCTGCCGCGCCAATGGCGTTTCCCTGATGGTGCAGATCTCCACCGACAAGGCGGTCA ATCCCACCAACGTCATGGGCGCTTCCAAGCGGGTGGCGGAGATGTACGCCCAGGCCCTGGATCTGGCCGAAAGCGACGGC GGCGGCACGCGCTTCGTCACAGTGCGCTTCGGCAACGTCCTGGGCTCCACCGGCTCGGTGGTGCCGCTGTTTCAGAAGCA GCTGGCCGAGGGTGGGCCGCTCACCGTCACCCATCCCGACATGACCCGCTATTTCATGACGGTCCGCGAAGCGGTGGAGC TGGTGCTGCAGGCCTCTGCCTTCGGCATCGGCCACCCCGCCTATCGCGGCAAGATTTTCGTCCTCGACATGGGCGAGCCG GTCAAGATCGTCCATCTGGCCCGCCAGATGATCCGCCTGGCCGGGCTGCGCCCCGATGTGGACGTCAAGATCACCTTCAC CGGCCTGCGTCCCGGCGAAAAGCTGTTCGAGGAGCTGTTCCACGGCTCCGAGCCGACCATCCAGACCGAGATGCCCGGCA TCCTGGTGGCCGAGCCCCGCGCCGCCGATGCGGCTGAACTTGGTGCCGCCATCGATGGCCTGGAGCAGGCATGCCGCCGC CACGACGCGGATTCCGCCCTTGCCGGCCTCGGCCGGCTGGTTCCCGAATACGCCGCCCATCCACCCCCCCCGAATTGA Protein sequence : MTLPPLSLNQRRSAPGSCRVFRGRVFRGMWTSMKLPPLSRAYLAFAHDVSMAALSFVMALYLRLGDDTWIWWDRLDLGLA TALFTLVAASVFLSQRLYRGVWRYASVNDLVALTRAATLTILVFLALLFLTTRLQALPRSVLLINWFVLLALLGGPRFIY RTFKDHHRNRRRAQGDHVRVPVLLVGAGDEAELFIRAAHSPDAEYRAVGLLSSRGARVGRHIHGIDVLGSTDEMGEVVAA LKAKGQAPQRLVITDHRLDGSEVRQLLDDADRLGMTLARIPRMMDLKDGVEERVTMRPIAVEDLLGRPQAVLDRVSMESM IKGRRVLVTGAGGSIGSELVRQISDFGPASLVLFEACEFNLYAIDQEISLRQPGMELVPLLGDVRDPVRVGEAMARYRPD LVFHAAALKHVPMVEYNPDEGILTNCVGTRLVADACRANGVSLMVQISTDKAVNPTNVMGASKRVAEMYAQALDLAESDG GGTRFVTVRFGNVLGSTGSVVPLFQKQLAEGGPLTVTHPDMTRYFMTVREAVELVLQASAFGIGHPAYRGKIFVLDMGEP VKIVHLARQMIRLAGLRPDVDVKITFTGLRPGEKLFEELFHGSEPTIQTEMPGILVAEPRAADAAELGAAIDGLEQACRR HDADSALAGLGRLVPEYAAHPPPPN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-77 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 9e-80 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| amb0099 | YP_419462.1 | nucleoside-diphosphate sugar epimerase | VFG0029 | Protein | 3e-65 | 42 |
| amb0099 | YP_419462.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 5e-79 | 41 |
