Gene Information

Name : BAB2_0058 (BAB2_0058)
Accession : YP_418303.1
Strain :
Genome accession: NC_007624
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 56647 - 57735 bp
Length : 1089 bp
Strand : -
Note : -

DNA sequence :
ATGATGTCAAACCGAAGTGACTTTATTGTGCCTGACGAGGCGGCTGTCAAACGGGCGGCCTCGGTCAATTTCCATCTGGA
ACCGCTACGCCCTTGGTTGGACGATCCGCAGATCACCGAAGTTTGCGTGAACCGGCCGGGCGAAGTGTTCTGCGAGCGAG
CAAGCGCGTGGGAATACTATGCGGTGCCAAACCTCGACTATGAACACCTGATTTCGCTGGGAACCGCCACCGCGCGGTTT
GTGGATCAGGATATTTCGGACAGCCGACCGGTGCTGTCTGCGATCCTGCCGATGGGTGAGCGCATTCAGATTGTGCGCCC
GCCCGCATGTGAGCACGGCACCATCTCGGTGACGATCCGCAAGCCGTCTTTCACCCGGCGCACACTGGAAGACTATGCGC
AGCAGGGCTTTTTCAAACACGTCAGACCCATGAGTAAGAGCCTGACGCCGTTTGAACAGGAACTGCTCGCATTGAAGGAA
GCTGGTGATTACATGAGCTTCCTGCGGCGGGCGGTACAGCTTGAAAGGGTGATCGTCGTCGCCGGCGAGACGGGATCAGG
CAAGACCACACTGATGAAAGCGCTGATGCAGGAAATTCCGTTCGATCAGCGCCTGATCACCATCGAGGACGTACCGGAGT
TGTTCTTGCCGGACCATCCGAACCACGTCCACCTGTTTTATCCGAGCGAAGCGAAGGAAGAAGAAAACGCACCAGTGACG
GCCGCCACGCTACTGCGGAGCTGCCTGCGCATGAAACCGACGCGCATCCTGCTTGCCGAGCTGCGCGGCGGCGAGACTTA
CGATTTCATCAACGTGGCCGCGTCCGGCCATGGCGGCAGCATCACCAGTTGCCATGCCGGTTCGTGCGAACTGACTTTCG
AGCGGCTGGCATTGATGGTGTTGCAGAACCGCCAGGGCCGCCAGTTGCCATACGAGATCATCCGCCGGCTGCTCTATCTG
GTGGTGGATGTCGTCGTGCACGTCCACAATGGCGTGCACGACGGCACTGGCCGCCATATATCTGAAGTTTGGTACGACCC
GAATACAAAACGGGCACTGTCACTGCAACACAGTGAGAAGACGCAATGA

Protein sequence :
MMSNRSDFIVPDEAAVKRAASVNFHLEPLRPWLDDPQITEVCVNRPGEVFCERASAWEYYAVPNLDYEHLISLGTATARF
VDQDISDSRPVLSAILPMGERIQIVRPPACEHGTISVTIRKPSFTRRTLEDYAQQGFFKHVRPMSKSLTPFEQELLALKE
AGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYPSEAKEEENAPVT
AATLLRSCLRMKPTRILLAELRGGETYDFINVAASGHGGSITSCHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYL
VVDVVVHVHNGVHDGTGRHISEVWYDPNTKRALSLQHSEKTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70289.1 Pilx11/VirB11-like protein Not tested HPI Protein 1e-47 44
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 1e-48 43
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 2e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BAB2_0058 YP_418303.1 type II secretion system protein E VFG2218 Protein 5e-163 99
BAB2_0058 YP_418303.1 type II secretion system protein E VFG0024 Protein 7e-68 48
BAB2_0058 YP_418303.1 type II secretion system protein E VFG2240 Protein 4e-49 42