Gene Information

Name : SAB0782 (SAB0782)
Accession : YP_416273.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : leukocidin chain lukM precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 850702 - 851628 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence : 
ATGTTTAAGAGAAAATTATTAGTTACAACTTTGTCGCTAGGTCTAATTGTTCCTATAGCTACACCATTTCAAGGTTCTAA
GGCTACTACTAATGCAGAAGATATTGGCGACGATGCAGAAGTGATTAAACGTACGGAAGATGTAAGTAGTAGGAAATGGG
GTGTAACACAAAATGTCCAATTTGATTTCGTAAAAGATAAAAAATATAACAAAGACGCATTAATTATTAAGATGCAAGGT
TTTATCAATTCTAGGACAACTTTCAATGATGTTAAACAAAATAGAGCAAATAAAAGAATGGTTTGGCCATTTCAATATAA
TATCGGTCTTACATCAAAAGACCAAAATACGAGCTTAATCAATTATCTTCCTAAAAATAAAATAGAAACAGTTGATGTTG
GTCAAACTTTAGGATATAACATTGGAGGTAAATTCCAGTCAGCACCATCTATAGGCGGAAATGGATCATTTAATTATTCT
AAGAGTATTAAATATTCCCAAAAGAGTTATGTCAGCGAAGTTGAACAACAAAGCTCAAAAACTATTAAGTGGGGGGTTAA
AGCAAATTCTTTTGTTATAGCAGGGCATCGATGGTCTGCTTACGATGAATTATTGTTTATAAGAAATACGACAAGAGGAC
CTAATGCTAGAGACTATTTTGTAGACGATAATGAATTGCCCCCTTTAATAACAAGTGGATTTAATCCGTCTTTTATCGCG
ACAGTATCTCACGAAAAAGATTCAGGCGATACGAGCGAATTTGAAATTACTTACGGTAGAAATATGGATGTTACCTATGC
AACCTACCTTCCTAAACAAGGTCTTTATCCAGAAAGAAAACATAATGAATTTGTAAACAGAAACTTTGTGGTCAAATATG
AAGTGAATTGGAAAACGCACGAAATTAAAGTAAAGGGGCACAACTAA

Protein sequence : 
MFKRKLLVTTLSLGLIVPIATPFQGSKATTNAEDIGDDAEVIKRTEDVSSRKWGVTQNVQFDFVKDKKYNKDALIIKMQG
FINSRTTFNDVKQNRANKRMVWPFQYNIGLTSKDQNTSLINYLPKNKIETVDVGQTLGYNIGGKFQSAPSIGGNGSFNYS
KSIKYSQKSYVSEVEQQSSKTIKWGVKANSFVIAGHRWSAYDELLFIRNTTRGPNARDYFVDDNELPPLITSGFNPSFIA
TVSHEKDSGDTSEFEITYGRNMDVTYATYLPKQGLYPERKHNEFVNRNFVVKYEVNWKTHEIKVKGHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_1909 YP_005737354.1 leukocidin chain lukM precursor Virulence ¥ÕSa3 Protein 5e-131 99
lukE NP_374927.1 leukotoxin LukE Virulence vSa¥â Protein 2e-103 74
lukE YP_001332753.1 leukocidin LukE precursor Virulence vSa¥â Protein 2e-103 74
lukE YP_494460.1 leukotoxin LukE Virulence vSa¥â Protein 2e-103 74
lukE YP_186708.1 leukotoxin LukE Virulence vSa¥â Protein 2e-103 74
lukE NP_646585.1 leukotoxin LukE Virulence vSa¥â Protein 2e-103 74
lukE NP_372344.1 leukotoxin S-subunit Virulence vSa¥â Protein 2e-103 74
SAKOR_01768 YP_008491956.1 Leukocidin S subunit lukE Virulence vSa¥â Protein 3e-103 74
lukS NP_646196.1 Panton-Valentine leukocidin chain S precursor Virulence ¥ÕSa2 Protein 2e-90 68
lukS-PV YP_494079.1 Panton-Valentine leukocidin, LukS-PV Virulence ¥ÕSa2 Protein 2e-90 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAB0782 YP_416273.1 leukocidin chain lukM precursor VFG1277 Protein 1e-90 68
SAB0782 YP_416273.1 leukocidin chain lukM precursor VFG1273 Protein 7e-93 67
SAB0782 YP_416273.1 leukocidin chain lukM precursor VFG1274 Protein 6e-83 66