Gene Information

Name : cap5M (SAB0068)
Accession : YP_415583.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 86671 - 87363 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
TTGAAGAAGTTACAGCTAAAGAAGTGGAAATGTCATAAAAATAACATTGAAGATGTTCATATAAATAAAAATTATAATTA
TCAAAGAAAATTAGATGCACTCGAAGAAGTGAGAAAAGGCTATTACCCAATTAAACGTGCGACTGACTTAGTATTAAGTA
TCGTTTTATTATTTTTAACATTTCCGATTATGTTCATATTCGCCATTGCTATCGTCATAGATTCGCCAGGAAACCCTATT
TATAGTCAGGTTAGAGTTGGGAAGATGGGTAAATTAATTAAAATATACAAATTACGTTCGATGTGTAAAAACGCAGAGAA
AAATGGTGCGCAATGGGCTGATAAAGATGATGATCGTATAACAAATGTCGGGAAGTTTATTCGTAAAACACGCATTGATG
AATTACCACAACTAATTAATGTTGTTAAAGGGGAAATGAGTTTTATTGGACCACGCCCGGAACGTCCGGAATTTGTAGAA
TTATTTAGTTCAGAAGTGATAGGTTTCGAGCAAAGATGTCTTGTTACACCAGGGTTAACAGGACTTGCGCAAATTCAAGG
TGGATATGACTTAACACCGCAACAAAAACTGAAATATGACATGAAATATATACATAAAGGTAGTTTAATGATGGAACTAT
ATATATCAATTAGAACATTGATGGTTGTTATTACAGGGGAAGGCTCAAGGTAG

Protein sequence : 
MKKLQLKKWKCHKNNIEDVHINKNYNYQRKLDALEEVRKGYYPIKRATDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPI
YSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVE
LFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 4e-26 43
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-25 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cap5M YP_415583.1 capsular polysaccharide biosynthesis glycosyltransferase VFG1309 Protein 1e-22 42