Gene Information

Name : rir1 (SAB0682)
Accession : YP_416176.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 748283 - 750379 bp
Length : 2097 bp
Strand : +
Note : Catalyzes the rate-limiting step in dNTP synthesis

DNA sequence :
ATGGAAGAGAAAAAGTACAATCATATTGAATTAAATAATGAGGTCACTAAACGAAGAGAAGATGGATTCTTTAGTTTAGA
AAAAGACCAAGAAGCTTTAGTAGCTTATTTAGAAGAAGTAAAAGACAAAACAATCTTCTTCGACACTGAAATCGAGCGTT
TACGTTATTTAGTAGACAACGATTTTTATTTCAATGTGTTTGATATTTATAGTGAAGCGGATCTAATTGAAATCACTGAT
TATGCAAAATCAATCCCGTTTAATTTTGCAAGTTATATGTCAGCTAGTAAATTTTTCAAAGATTACGCTTTGAAAACAAA
TGATAAAAGTCAATACTTAGAAGACTATAATCAACACGTTGCCATTGTTGCTTTATACCTAGCAAATGGTAATAAAGCAC
AAGCTAAACAATTTATTTCTGCTATGGTTGAACAAAGATATCAACCAGCGACACCAACATTTTTAAACGCAGGCCGTGCG
CGTCGTGGTGAGCTAGTGTCATGTTTCTTATTAGAAGTGGATGACAGCTTAAATTCAATTAACTTTATTGATTCAACTGC
AAAACAATTAAGTAAAATTGGGGGCGGCGTTGCAATTAACTTATCTAAATTGCGTGCACGTGGTGAAGCAATTAAAGGAA
TTAAAGGCGTAGCGAAAGGCGTTTTACCTATTGCTAAGTCACTTGAAGGTGGCTTTAGCTATGCAGATCAACTTGGTCAA
CGCCCTGGTGCTGGTGCAGTGTACTTAAATATCTTCCATTATGATGTAGAAGAATTTTTAGATACTAAAAAAGTAAATGC
GGATGAAGATTTACGTTTATCTACAATATCAACTGGTTTAATTGTTCCATCTAAATTCTTCGATTTAGCTAAAGAAGGTA
AGGACTTTTATATGTTTGCACCTCATACAGTTAAAGAAGAATATGGTGTGACATTAGACGATATCGATTTAGAAAAATAT
TATGATGACATGGTTGCAAACCCAAATGTTGAGAAAAAGAAAAAGAATGCGCGTGAAATGTTGAATTTAATTGCGCAAAC
ACAATTACAATCAGGTTATCCTTATTTAATGTTTAAAGATAATGCTAACAGAGTGCATCCGAATTCAAACATTGGACAAA
TTAAAATGAGTAACTTATGTACGGAAATTTTCCAACTACAAGAAACTTCAATTATTAATGACTATGGTATTGAAGACGAA
ATTCAACGTGATATTTCTTGTAACTTGGGCTCATTAAATATTGTTAATGTGATGGAAAGCGGAAAATTCAGAGATTCAGT
TCACTCTGGTATGGACGCATTAACTGTTGTGAGTGATGTAGCAAATATTCAAAATGCACCAGGAGTTAGAAAAGCTAACA
GTGAATTACATTCAGTTGGTCTTGGTGTCATGAATTTACACGGTTACCTTGCAAAAAATAAAATTGGTTATGAGTCAGAA
GAAGCAAAAGATTTTGCAAATATCTTCTTTATGATGATGAATTTCTACTCAATCGAACGTTCAATGGAAATCGCTAAAGA
GCGTGGTATCAAATATCAAGACTTTGAAAAGTCTGATTATGCTAATGGTAAATATTTCGAGTTCTATACAACTCAAGAAT
TTGAACCTCAATTCGAAAAAGTACGTGAATTATTCGACGGTATGGCTATTCCTACTTCTGAGGATTGGAAGAAACTACAA
CAAGATGTTGAACAATATGGTTTATATCATGCATATAGATTAGCAATTGCTCCAACACAAAGTATTTCTTATGTTCAAAA
TGCTACAAGTTCTGTAATGCCAATCGTTGACCAAATTGAACGTCGTACTTATGGTAATGCGGAAACATTTTACCCTATGC
CATTCTTATCACCACAAACAATGTGGTACTACAAATCAGCATTCAATACTGATCAGATGAAATTAATCGATTTAATAGCG
ACAATTCAAACGCATATTGACCAAGGTATCTCAACGATACTTTATGTTAATTCTGAAATTTCTACACGTGAGTTAGCAAG
ATTATATGTATATGCGCACTATAAAGGATTAAAATCACTTTACTATACTAGAAATAAATTATTAAGTGTAGAAGAATGTA
CAAGTTGTTCTATCTAA

Protein sequence :
MEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITD
YAKSIPFNFASYMSASKFFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNAGRA
RRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPIAKSLEGGFSYADQLGQ
RPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKY
YDDMVANPNVEKKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGIEDE
IQRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELHSVGLGVMNLHGYLAKNKIGYESE
EAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQ
QDVEQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLIDLIA
TIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 2e-134 43