Gene Information

Name : set2 (SAB0383)
Accession : YP_415884.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : superantigen-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 419410 - 420069 bp
Length : 660 bp
Strand : +
Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation

DNA sequence : 
ATGAAATTTACAGCATTAGCAAAAGCAACATTAGCATTAGGAATTTTAACAACTGGAACTTTAACAACAGAGGCTCATTC
CAGCCATGCAAAACAAAATCAAGAGTCAGTAAACAAACATGACAAGGAAGCATTATACCGATACTACACTGGAAAGACTA
TGGAATTGAAAAACATTAATGCTTTGAAGCATGGTAAAAATAACTTGCGTTTTAAATATAGAGGCATGAAGATTCAAGTA
TTGCTGCTTGGAAATGATAAAAATAGATTTCAACAGCGTAGTTATAAGGGCTTAGATGTGTTTTTTGTTCAAGAAAAAAG
AGACAAGCATGACATATTTTATACTGTTAGTGGCGTAATACAGACGAATAAAACATCTGGAGTTGTCAGTGCCCCAATAT
TAAATGTTACAAAAGAAAAGGGTGAAGATGCTTTTGTGAAAGGGTACCCTTATTATATTAAAAAAGAAAAAATAACATTA
AAAGAGTTAGATTTTAAGTTGAGAAAGCATCTAATCGAAAAATATGGACTTTATAAAACAATCTCAAAAGATGGTAGGGT
TAAAATTAGCTTGAAAGATGGCAGTTTTTATAACCTTGATTTAAGGTCTAAATTAAAATTCAAATATATGGGGGGAAGTC
ATAGAAAGCAAACAAATTAA

Protein sequence : 
MKFTALAKATLALGILTTGTLTTEAHSSHAKQNQESVNKHDKEALYRYYTGKTMELKNINALKHGKNNLRFKYRGMKIQV
LLLGNDKNRFQQRSYKGLDVFFVQEKRDKHDIFYTVSGVIQTNKTSGVVSAPILNVTKEKGEDAFVKGYPYYIKKEKITL
KELDFKLRKHLIEKYGLYKTISKDGRVKISLKDGSFYNLDLRSKLKFKYMGGSHRKQTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
set25 NP_645208.1 superantigen-like protein Virulence vSa¥á Protein 2e-79 92
SACOL0474 YP_185364.1 superantigen-like protein Virulence vSa¥á Protein 3e-79 92
set14 NP_370953.1 superantigen-like protein Virulence vSa¥á Protein 3e-79 92
set14 NP_373640.1 superantigen-like protein Virulence vSa¥á Protein 3e-79 92
set10nm YP_001331431.1 superantigen-like protein Virulence vSa¥á Protein 3e-79 92
SAUSA300_0404 YP_493118.1 superantigen-like protein Virulence vSa¥á Protein 3e-79 92
SAS0393 YP_042518.1 superantigen-like protein Virulence vSa¥á Protein 2e-79 92
SAKOR_00413 YP_008490597.1 Exotoxin Virulence vSa¥á Protein 1e-79 91
set4 YP_039882.1 superantigen-like protein Virulence vSa¥á Protein 1e-67 82
SAMSHR1132_03770 YP_005324899.1 exotoxin 4 Virulence vSa¥á Protein 1e-65 80
SAS0392 YP_042517.1 superantigen-like protein Virulence vSa¥á Protein 5e-23 43
set24 NP_645207.1 superantigen-like protein Virulence vSa¥á Protein 5e-23 43
set13 NP_370952.1 superantigen-like protein Virulence vSa¥á Protein 6e-23 42
set13 NP_373639.1 superantigen-like protein Virulence vSa¥á Protein 6e-23 42
SAKOR_00412 YP_008490596.1 Exotoxin Virulence vSa¥á Protein 1e-22 42
SACOL0473 YP_185363.1 superantigen-like protein Virulence vSa¥á Protein 2e-23 41
set9nm YP_001331430.1 superantigen-like protein Virulence vSa¥á Protein 2e-23 41
SAUSA300_0403 YP_493117.1 superantigen-like protein Virulence vSa¥á Protein 2e-23 41