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Name : set9 (SAB0378) Accession : YP_415879.1 Strain : Staphylococcus aureus RF122 Genome accession: NC_007622 Putative virulence/resistance : Virulence Product : superantigen-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 413678 - 414724 bp Length : 1047 bp Strand : + Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation DNA sequence : ATGAAAATGAGAACAATTGCTAAAACCAGTTTAGCACTAGGGCTTTTAACAACAGGCGCAATTACAGTAACGACGCAATC GGTCAAAGCAGAAAAAGTACCAATGCTTAAAGCAGAGCGATTAGCAATGATAAACATAACAACAGGTGCAAATACAGCGA CAACACAAGCAGCTAACACAAGACAAGAACGCACGCCTAAACTCGAAAAGGCACCAAATACTAATGAGGAAAAAACCTCA GCTTCCAAAATAGAAAAAATATCACAACCTAAACAAGAAGCGCAGAAATCGCTTAATATATCAGCAACGCCAGCACCTAA ACAAGAACAATCACAAACGACAACCGAATCCACAACGCCGAAAACTAAAGTGACAACACCTCCATCAATAAACACGCCAC AACCAATGCAATCTACTAAATCAGACACACCACAATCTCCAACCATAAAACAAGCACAAACAGATATGACTCCTAAATAT GAAGATTTAAGAGCGTATTATACGAAACCGAGTTTTGAATTTGAAAAGCAGTTTGGATTTATGCTCAAACCATGGACGAC GGTTAGGTTTATGAATGTTATTCCAAATAGGTTCATCTATAAAATAGCTTTAGTTGGAAAAGATGAGAAAAAATATAAAG ATGGACCTTACGATAATATCGATGTATTTATCGTTTTAGAAGACAATAAATATCAATTGAAAAAATATTCTGTCGGTGGC ATCACGAAGACTAATAGTAAAAAAGTTGATCACAAAGCAGAATTAAGCATTACTAAAAAAGATAATCAAGGTATGATTTC ACGCGATGTTTCAGAATACATGATTACTAAGGAAGAGATTTCCTTGAAAGAGCTTGATTTTAAATTGAGAAAACAACTTA TTGAAAAACATAATCTTTACGGTAACATGGGTTCAGGAACAATCGTTACTAAAATGAAAAACGGTGGGAAGTATACGTTT GAATTACACAAAAAACTGCAAGAGCATCGTATGGCAGATGTCATAGAAGGTACAAACATTGATAAAATTGAAGTGAATAT AAAATAA Protein sequence : MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKVPMLKAERLAMINITTGANTATTQAANTRQERTPKLEKAPNTNEEKTS ASKIEKISQPKQEAQKSLNISATPAPKQEQSQTTTESTTPKTKVTTPPSINTPQPMQSTKSDTPQSPTIKQAQTDMTPKY EDLRAYYTKPSFEFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQLKKYSVGG ITKTNSKKVDHKAELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVTKMKNGGKYTF ELHKKLQEHRMADVIEGTNIDKIEVNIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| set8 | NP_370948.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 3e-125 | 97 |
| set8 | NP_373634.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 3e-125 | 97 |
| SACOL0470 | YP_185360.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-121 | 94 |
| set3nm | YP_001331424.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-121 | 94 |
| SAUSA300_0397 | YP_493111.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-121 | 94 |
| set18 | NP_645201.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 6e-125 | 94 |
| SAS0386 | YP_042511.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 7e-125 | 94 |
| SAKOR_00406 | YP_008490590.1 | Exotoxin | Virulence | vSa¥á | Protein | 1e-124 | 94 |
| SAMSHR1132_03740 | YP_005324896.1 | exotoxin | Virulence | vSa¥á | Protein | 1e-85 | 68 |
| SAR0424 | YP_039876.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 7e-82 | 59 |
