Gene Information

Name : tsst-1 (SAB0360c)
Accession : YP_415862.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : toxic shock syndrome toxin-1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 399750 - 400454 bp
Length : 705 bp
Strand : -
Note : -

DNA sequence :
ATGAATAAAAAATTACTAATGAAATTTTTCATCGTAAGCCCTTTGTTGCTTGCGACAATCGCTACAGGTTTTACCCCTGT
TCCCTTATCATCTAATCAAATAATCAAAACTGCAAAAGCATCTACAAACGATAATATAAAGGATTTGCTAGACTGGTATA
GTAGTGGGTCTGACGCTTTTACAAATAGTGAAGTTTTAGATAATTCCTTAGGATCTATGCGTATAAAAAACACAGATGGC
AGCATCAGCCTTATAATTTTTCCGAGTCCTTATTATAGCCCTACTTTTTCAAAAGGGGAAAAAGTTGACTTAAACACAAA
AAGAACTAAAAAAAGCCAACATACTAGCGAAGGAACTTGGATTCATTTCCAAATAAGTGGTGTTACAAATACTGAAAAAT
TACCTACTCCAATAGAACTACCTTTAAAAGTTAAGGTTCATGGTAAAGATAGTCCATTAAAGTATTGGCCAAAGTTCGAT
AAAAAACAATTAGCTATATCAACTTTAGACTTTGAAATTCGTCATCAGCTAACTCAAATACATGGATTATATCGTTCAAG
CGATAAAACGGGTGGTTATTGGAAAATAACAATGAATGACGGATCCACATATCAAAGTGATTTATCTAAAAAGTTTGAAT
ACAATACTGAAAAACCACCTATAAATATTGATGAAATAAAAACTATAGAAGCAGAAATTAATTAA

Protein sequence :
MNKKLLMKFFIVSPLLLATIATGFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDAFTNSEVLDNSLGSMRIKNTDG
SISLIIFPSPYYSPTFSKGEKVDLNTKRTKKSQHTSEGTWIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYWPKFD
KKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tsst-1 YP_415862.1 toxic shock syndrome toxin-1 Virulence SaPIbov Protein 1e-105 100
tst AAG29601.1 toxic shock syndrome toxin-1 Virulence SaPIbov Protein 9e-106 100
tst YP_005735943.1 toxic shock syndrome toxin-1 Virulence SaPI1 Protein 3e-104 99
tst ABJ97288.1 toxic shock syndrome toxic-1 Virulence SaPI2 Protein 1e-102 98
unnamed AET14347.1 toxic shock syndrome toxin-1 Virulence SaPI68111 Protein 8e-104 98
tst AAC28954.1 toxic shock syndrome toxin-1 Virulence SaPI1 Protein 8e-104 98
tst NP_372535.1 toxic shock syndrome toxin-1 Virulence vSa4 Protein 1e-103 98
tst NP_375120.1 toxic shock syndrome toxin-1 Virulence vSa4 Protein 1e-103 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tsst-1 YP_415862.1 toxic shock syndrome toxin-1 VFG1809 Protein 5e-104 98