Gene Information

Name : SAB0350 (SAB0350)
Accession : YP_415852.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Unknown
Product : pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 392652 - 393521 bp
Length : 870 bp
Strand : +
Note : -

DNA sequence :
ATGAATGAAATTAAATTAGAATATGACACACATGTTTCAGTGGTACATTATGAAAGTTTAGACTCACGTTCATTTAAGAG
CTTTTCAAAACCTAAATGGAGTAAGTTAATTAATAAACTGTCTGTGCCTATAGAAGCAAATTATAAGTATGCACGTGGTG
TTGCTGTTTACGGTGATATTAAAAACGGTGCAAATGATCATGGTGAAATTATCAAAAAGCATCGCAATGACGTTAATGTC
GTATACAGAGATGTGATTGTACTTGATTACGATGAAATAAATGATTTAAAGCAATTACATGAAGCAATCAGCTCAGCTTT
AAGCAATGTTGCATGGTTTTGGCACACATCGTTCAGCCATACAACTGAACAAGCTAGAATACGCCTGTATATCCCTCTGA
ATGAGCGAATAAGTGCAAATGATTATCGTAATTATACAAAAGTATTAGCAAATAAAATTGGTCGTAAAGTGGATGAAGGT
TCATATCAGCCAAGTAGATGTTTTGCACTACCAGTTATTCAAAAAGGACACATATTTATTAAACGAGTGAATGACTGTCC
AATTATGGATGTTGATATGCTTGAACAGTGGTTAAAGGAGTATGAGCAATCAAATGCTAGTCCTAATGTCATAGCATACA
CCCGACGCGATAGTAAGTACTGGCGCGAGTTATGCTTTGGAACAACCGAAGGCAATCGTAACAATGCACTAGCTAGCTTA
GTTGGGCATTTATTAAGATGTCACGTTAATGATTATATTGTGTATTCATTCGCTTTATTATGGGGACAATTCGCATGTAA
ACCACCTATGAAAGAACAAGAAATCAACGCCACTTTTCAATCGATATTAAATAAACACTATAACAATTAG

Protein sequence :
MNEIKLEYDTHVSVVHYESLDSRSFKSFSKPKWSKLINKLSVPIEANYKYARGVAVYGDIKNGANDHGEIIKKHRNDVNV
VYRDVIVLDYDEINDLKQLHEAISSALSNVAWFWHTSFSHTTEQARIRLYIPLNERISANDYRNYTKVLANKIGRKVDEG
SYQPSRCFALPVIQKGHIFIKRVNDCPIMDVDMLEQWLKEYEQSNASPNVIAYTRRDSKYWRELCFGTTEGNRNNALASL
VGHLLRCHVNDYIVYSFALLWGQFACKPPMKEQEINATFQSILNKHYNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG29612.1 Orf15 Not tested SaPIbov Protein 1e-124 100
SAB0350 YP_415852.1 pathogenicity island protein Not tested SaPIbov Protein 2e-124 100
SAB1905c YP_417364.1 mobile element-associated protein Not tested SaPIbov2 Protein 4e-122 97
SAR0374 YP_039831.1 hypothetical protein Not tested SaPI4 Protein 5e-121 96
SA1829 NP_375130.1 hypothetical protein Not tested vSa4 Protein 1e-120 95
SAV2022 NP_372546.1 hypothetical protein Not tested vSa4 Protein 1e-120 95
SAAV_0796 YP_003281719.1 pathogenicity island protein ORF15 Not tested SaPIAv Protein 2e-117 94
unnamed ABJ97299.1 hypothetical protein Not tested SaPI2 Protein 3e-120 94
unnamed AAC28965.2 - Not tested SaPI1 Protein 2e-104 85
SAV0790 NP_371314.1 hypothetical protein Not tested vSa3 Protein 4e-103 84
SACOL0896 YP_185767.1 pathogenicity island protein Not tested vSa1 Protein 9e-101 80
unnamed AAL04137.1 unknown Not tested SaPI3 Protein 7e-101 80
unnamed AAP55245.1 unknown Not tested SaPIbov2 Protein 1e-79 61