Gene Information

Name : SAB0342c (SAB0342c)
Accession : YP_415844.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 388840 - 389976 bp
Length : 1137 bp
Strand : -
Note : -

DNA sequence :
ATGATTAAAAAATATAAGAAGAAAGACGGTTCGACTGCCTATATGTTTGTCGCATATTTAGGTACTGATCCAATTACTGG
TAAGCAAAAGAGAACCACTAGACGAGGCTTTAAGACTGAAAGAGAAGCTAAAATTGCTGAGGCAAAACTTCAAACAGAAG
TAAGTCAAAATGGCTTTCTAAACAACGATATAACGACGTTTAAAGAAGTATATGAGTTGTGGCTTGAACAGTATCAAAAT
ACTGTAAGAGAAAGCACATATCAACGTGTTTTAACTTTATTTGATACAGCTATATTAGAACATTTCCAAGATGTACCTAT
TAAGAAAATAACCGTTCCATATTGCCAAAAAGTTATTAATAAATGGAACAAAAAGTATTCTGATATTAAAGCTATACGAA
TATACACATCTAATGTGTTTAAATATGCCGTAAGCCTTAAGATAATCGTTGATAATCCGTTTGCACATACAAAAGCACCT
AGAAAAAAAGAAGCGCAACAAGACGCATCTACAAAGTATTATTCAAGTGATGAATTGAAACAGTTTTTAACTTTTGTTGA
AGATGACCCATTATATTATGCTATTTTTCGAACATTAGCTTTTACTGGCTTTAGACGTGGAGAATTAATGGCTTTAACAT
GGAACGATATTGATTTTACTAAACAAACCATATCTATTAATAAGACTTGCGCAAGAGGTGCAAATTATAAACTGGTAATA
CAAGAGCCTAAAACAAAATCATCTCACAGAACAATAAGTATTGATGATAAAACTGCAAGTGTATTGAAATCATGGCGCAC
TCATCAAAGAGTGGAGTCCCTTAAATATGGTCACAATACCTCTGATAAACATCAACATGTTTTCACTACTGTACGTGATA
ATAAACCACTATATCCCGAGCATTGCAATAAAGCATTGGACTTAATTTGTGAGAAGAATAGTTTTAAGAGAATTAAAGTT
CATGGTTTTAGACACACTCATTGTTCTCTTTTGTTCGAGGCTGGCCTTTCTATTCAAGAAGTACAAGACAGATTAGGTCA
CGGGGACATCAAGACAACTATGGATATTTACGCTCACGTAACTGAAAAACAACGTGATCAGGTGGCTGATAAATTCGCAA
AATACATCAATTTTTAA

Protein sequence :
MIKKYKKKDGSTAYMFVAYLGTDPITGKQKRTTRRGFKTEREAKIAEAKLQTEVSQNGFLNNDITTFKEVYELWLEQYQN
TVRESTYQRVLTLFDTAILEHFQDVPIKKITVPYCQKVINKWNKKYSDIKAIRIYTSNVFKYAVSLKIIVDNPFAHTKAP
RKKEAQQDASTKYYSSDELKQFLTFVEDDPLYYAIFRTLAFTGFRRGELMALTWNDIDFTKQTISINKTCARGANYKLVI
QEPKTKSSHRTISIDDKTASVLKSWRTHQRVESLKYGHNTSDKHQHVFTTVRDNKPLYPEHCNKALDLICEKNSFKRIKV
HGFRHTHCSLLFEAGLSIQEVQDRLGHGDIKTTMDIYAHVTEKQRDQVADKFAKYINF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG29618.1 integrase-like protein Not tested SaPIbov Protein 2e-177 100
SAOV_0414c YP_005735930.1 integrase Not tested SaPI1 Protein 3e-177 100
SAB0342c YP_415844.1 integrase Not tested SaPIbov Protein 3e-177 100
SAPIG0469 YP_005733279.1 integrase Not tested SAPI-S0385 Protein 5e-177 99
sip AAP55251.1 integrase protein Not tested SaPIbov2 Protein 5e-146 78