Gene Information

Name : SAB2538c (SAB2538c)
Accession : YP_417982.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : capsular polysaccharide biosynthesis protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 2694409 - 2695101 bp
Length : 693 bp
Strand : -
Note : -

DNA sequence : 
ATGACGAATAAACGAAGAAGTACATCAAGTTTAATTGTCCATGAACAACCAAAGTCACCTATTAGCGAGAAATTTCGAGG
CATAAGATCAAATATTATGTTTGCAAATCCTGACAGTGCAGTTCAAAGCATTGTAATCACTTCAGAGGCAACAGGCGCAG
GTAAGTCTACAATTGCAGCAAATTTAGCAGTTGCATATGCACAAGCAGGTTATAAAACATTAATCGTAGACGGGGATATG
CGTAAGCCTACGCAACACTATATTTTTAATTTGCCAAACAATGAAGGACTTTCAAGTTTATTGCTAAATTGGTCAACTTA
TCAAGACAGTATTATCTCAACTGAAATTCAAGATTTAGACGTCTTGACGTCTGGGCCAATCCCACCGAATCCGTCAGAGT
TAATTACATCAAGGGCATTTGCAAATTTATATGACACGTTATTGATGAATTATAACTTTGTTATTATCGATACGCCACCA
GTGAACACAGTTACAGATGCGCAATTATTTTCAAAGTTTACCGGCAATGTTGTCTACGTAGTTAATTCGGAAAATAATAA
TAAAGATGAAGTTAAAAAAGGAAAAGAACTTATTGAAGCAACAGGTGCTAAATTATTAGGTGTAGTCTTAAATAGAATGC
CTAAAGATAAAAGTGCTAGTTACTATGCATATTATGGGACTGATGAATCATGA

Protein sequence : 
MTNKRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEATGAGKSTIAANLAVAYAQAGYKTLIVDGDM
RKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-68 61
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-57 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAB2538c YP_417982.1 capsular polysaccharide biosynthesis protein VFG1298 Protein 4e-62 58