|
Name : hlgB (SAB2302) Accession : YP_417758.1 Strain : Staphylococcus aureus RF122 Genome accession: NC_007622 Putative virulence/resistance : Virulence Product : gamma-hemolysin component B Function : - COG functional category : - COG ID : - EC number : - Position : 2433141 - 2433947 bp Length : 807 bp Strand : + Note : - DNA sequence : ATGAAAATGAATAAATTAGTCAAATCATCCGTTGCTACTTCTATGGCATTATTATTACTTTCTAGTACTGCTAATGCTGA AGGCAAAATAACACCAGTCAGCGTAAAAAAAGTCGATGACAAAGTTACTTTATACAAAACAACAGCCACAGCAGATTCTG ATAAATTTAAAATTTCACAGATTTTAACATTTAATTTCATCAAAGATAAAAGTTATGATAAAGATACTTTAGTACTTAAA GCTACTGGGAATATTAACTCAGGCTTTGTGAAACCTAATCCTAATGACTATGACTTTTCAAAATTATATTGGGGAGCTAA ATACAATGTATCTATAAGCTCACAATCTAATGATTCAGTAAACGTCGTTGATTATGCACCAAAAAATCAAAATGAAGAGT TTCAAGTTCAAAATACTTTAGGTTATACATTTGGTGGTGACATTAGTATCTCTAATGGTTTATCTGGTGGACTTAATGGA AATACAGCTTTTTCTGAAACAATTAATTATAAACAAGAAAGTTACAGAACAACATTAAGTCGCAACACAAATTATAAAAA TGTTGGCTGGGGAGTTGAAGCACATAAAATTATGAATAATGGTTGGGGACCTTATGGACGAGATAGCTTCCACCCAACAT ATGGTAATGAACTCTTCTTAGCTGGCAGACAAAGCATTGCATACGCTGGCCAAAACTTCATAGCGCAACACCAAATGCCA TTATTATCTAGAAGTAACTTCAATCCAGAATTTTTAAGCGTACTATCACACAGACAAGATGGCGCTAAAAATCTAAAATT ACAGTAA Protein sequence : MKMNKLVKSSVATSMALLLLSSTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLK ATGNINSGFVKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNG NTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSIAYAGQNFIAQHQMP LLSRSNFNPEFLSVLSHRQDGAKNLKLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 7e-78 | 78 |
| lukF | NP_646195.1 | Panton-Valentine leukocidin chain F precursor | Virulence | ¥ÕSa2 | Protein | 6e-68 | 74 |
| lukF-PV | YP_494078.1 | Panton-Valentine leukocidin, LukF-PV | Virulence | ¥ÕSa2 | Protein | 6e-68 | 74 |
| hlgB | YP_005326172.1 | gamma-hemolysin component B (fragment) | Virulence | vSa¥â | Protein | 1e-48 | 72 |
| SAOV_1908 | YP_005737353.1 | Panton-Valentine leukocidin LukF-PV chain precursor | Virulence | ¥ÕSa3 | Protein | 1e-68 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlgB | YP_417758.1 | gamma-hemolysin component B | VFG1275 | Protein | 1e-91 | 99 |
| hlgB | YP_417758.1 | gamma-hemolysin component B | VFG1276 | Protein | 3e-68 | 74 |
