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Name : kdpD (SAB1963) Accession : YP_417422.1 Strain : Staphylococcus aureus RF122 Genome accession: NC_007622 Putative virulence/resistance : Unknown Product : two component sensor protein Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2205 EC number : - Position : 2096397 - 2099054 bp Length : 2658 bp Strand : + Note : - DNA sequence : ATGTCAAACACTGAATCGCTAAACATAGGAAAAAAGCGTGGATCTTTAACAATTTACATCGGTTACAGTCCAGGTGTTGG TAAAACATTTGAGATGCTTTCAAATGCCATTGAACTATTTCAAAGTAACGTTGATATTAAAATAGGATATATTGAACCCC ATCAACGTGATGAAACAAATGCATTAGCTGAACAATTACCTAAAATCGCAACCAATTTTACTAAACATGGTAGTCATCAT TTTCAATATTTAGATGTCGACCGCATAATCGAAGAATCGCCGACAATAGTACTTATCGATGAGTTAGCACATACGAATAT TTCTAGAGATCGTCATGAAAAACGCTATATGGATATTGAAGAAATTTTAAATCATGGTATCGATGTTCATACTACTTTGA ACATTCAACATATTGAAAGTTTAAGTAGTCAAATTGAACTGATGACCGGTGTACATGTTAAAGAACGTGTACCCGACTAT TTCATAATGAGCGCCGATGTATTAGAAGTCGTAGATATCTCACCTGAACAATTAATTAAACGCTTAAAAGCTGGCAAGGT ATATAAAAGGGATAGGCTAGATGTAGCATTTAATAATTTCTTTACGTATGCCCACCTAAGCGAACTGCGTACATTGACGT TAAGAACAGTTGCCGACTTGATGAGTGATAAAGAAAAAGTCCGACACAACAATAAAACGTCACTCAAACCTCATATTGCT GTGGCAATTAGTGGGAGTATTTATAATGAAGCAGTAATTAAAGAGGCATTCCACATTGCTCAAAAAGAACATGCAAAATT CACTGCTATTTATATAGATGTATTCGAAAAAAACAGGCAATATAAAGATAGTCAAAAGCAAGTGCATCAACATCTCATGC TTGCAAAATCATTAGGAGCAAAAGTAAAAGTAGTTTATAGCCAAACCGTTGCATTAGGATTAGACGAATGGTGTAAAAAT CAAGATGTAACCAAATTAATTATCGGACAACATATTAGAAATAAGTGGCGAGACTTTTTCAATAAACCTTTAATTGACCA TTTAATGTCCTTTGAACATAGCTATAAAATCGAAATCGTTCCAATCAAACAAATACCTGTTGAATTGAAAATGAACAAGT CACCCTATCGTCCTAAAGGCAAACGTTTCGCCATAGATATGTTAAAAATGATTTTGATTCAAATAATTTGTGTAATGATG GGACTATGGATTTATCAACTTGATAAGCATGAGTCTAGTACGATTATTTTAATGATTTTTCTCATCGGCATCATTTTATT ATCCATTTGGACGCGGTCCTACATCATCGGCTTTTTAGCAGCAATTATTAACGTATTTGTTTTTAATTATTTTTTTACGG AACCTAGATATACATTTGAAGTATACCGCTTTGACTATCCTATTACATTTATCGTTAGCATTTTAACAAGTATTTTAACG AGTGCTTTATTAAAACAAATTAAATTCCAATACTCCATTACTAAAAAGCAACTTTATCGTACAGATTTATTATTTCAATT TAATGATTCGATTAAACAAACTTATACAGTTGAAAACTTACTAATAAATGCTGGATACCAAATTAATCAATTATTGCAAC AATCAATTACTATATACGTTATCAATCAATCCAAAGTAATTAAAACAATACCATTGCAAAACCATATCGATAATACGACT CAACAGCATGAACAAGCATTAAGCTGGGTAATTAAAAATGAAAGACAAGCTGGTGCAACAACAGATACATTTCCAGGCAT TAATAAATGGTTGATACCAATTGGCACATCTCCGATTAAAGGCATTCTAGCCATTGATTACCAAAGTTCTCAAGTGATTA ATCCATATGATGCATCAATATTAGAATCAATGTTAAATGAACTTTCTCTCGCCGTTGAAAATGTGACGTTACTTAAACAA ACGAGAGAATCCATGTTACAGGCTGAACGTCAACTGACACATTCAAATTTTTTAAGATCAATTTCGCATGACATACGTAC ACCGTTAACAACAATTATGGGAAATTTAGATATTTTAGTATCACATAGTAAAGATATGTCTATCATAGAAAAGGAACAAT TACTTGTGCATAGTTTTCAAGAAAGTCAGTATTTATATCTTTTAGTGACAAATATTTTATCATTAACAAAATTACAATCA TCAAATGTTCAGATAAAATTGCAACCTTATCTCGTTAGTGAATTAGTAGAAGAAATCGATATGATTTTAGAACGTCGCCA TTTAAAAAAGCGTATAACTATATCATCCTCAGTAGATTTACAGTTTATACACATTGACAGTAAGTTGATTTTACAAGCTT TATTCAATTTGATTGAAAATGCAGTTAAACACACTTCTACTGACACCAAAATCAATTTATCTATTCGTTATGCTAGCGAT GAACAAATCGAATTTGCCGTTATAGACGAAGGACCTGGAATTAGTTTAGAAGAACAACAAAAGATATTCGAGCCTTTTTA CACAAGATCAAATAAATATTTTAAAGATAACCAAAAAGAAAGCATGGGACTAGGCTTATATTTAGTACAGACTATCCTAC ACAAACATCAATCAAATTTACAATATAAACCAAACCAACCACACGGCAGTATATTCTATTTCAATATAGATACAGACTTT AATGAAGGAGACATATAA Protein sequence : MSNTESLNIGKKRGSLTIYIGYSPGVGKTFEMLSNAIELFQSNVDIKIGYIEPHQRDETNALAEQLPKIATNFTKHGSHH FQYLDVDRIIEESPTIVLIDELAHTNISRDRHEKRYMDIEEILNHGIDVHTTLNIQHIESLSSQIELMTGVHVKERVPDY FIMSADVLEVVDISPEQLIKRLKAGKVYKRDRLDVAFNNFFTYAHLSELRTLTLRTVADLMSDKEKVRHNNKTSLKPHIA VAISGSIYNEAVIKEAFHIAQKEHAKFTAIYIDVFEKNRQYKDSQKQVHQHLMLAKSLGAKVKVVYSQTVALGLDEWCKN QDVTKLIIGQHIRNKWRDFFNKPLIDHLMSFEHSYKIEIVPIKQIPVELKMNKSPYRPKGKRFAIDMLKMILIQIICVMM GLWIYQLDKHESSTIILMIFLIGIILLSIWTRSYIIGFLAAIINVFVFNYFFTEPRYTFEVYRFDYPITFIVSILTSILT SALLKQIKFQYSITKKQLYRTDLLFQFNDSIKQTYTVENLLINAGYQINQLLQQSITIYVINQSKVIKTIPLQNHIDNTT QQHEQALSWVIKNERQAGATTDTFPGINKWLIPIGTSPIKGILAIDYQSSQVINPYDASILESMLNELSLAVENVTLLKQ TRESMLQAERQLTHSNFLRSISHDIRTPLTTIMGNLDILVSHSKDMSIIEKEQLLVHSFQESQYLYLLVTNILSLTKLQS SNVQIKLQPYLVSELVEEIDMILERRHLKKRITISSSVDLQFIHIDSKLILQALFNLIENAVKHTSTDTKINLSIRYASD EQIEFAVIDEGPGISLEEQQKIFEPFYTRSNKYFKDNQKESMGLGLYLVQTILHKHQSNLQYKPNQPHGSIFYFNIDTDF NEGDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpD | NP_370595.1 | sensor protein KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
| kdpD | NP_373307.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
| SH0032 | YP_251947.1 | hypothetical protein | Not tested | SCCmec | Protein | 0.0 | 59 |
| kdpD | YP_190032.1 | sensor histidine kinase KdpD | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
| SAR0069 | YP_039537.1 | sensor kinase | Not tested | Type-II SCCmec | Protein | 0.0 | 59 |
