Gene Information

Name : SAB1912 (SAB1912)
Accession : YP_417371.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2037180 - 2038352 bp
Length : 1173 bp
Strand : +
Note : -

DNA sequence :
ATGGCATCATATGAAAAACGCGGAAGTACATGGCGTTATCGTATATCACTAGGAAAAGACGTAAAAACGGGCAAATATAA
ATATATTTCAAACTCAGGTTTTAAACGCAAATCAGACGCTAAACATCACGCTGAAATGGTAGAACGCCAATTAAGAACTG
GTGAATATATCGCACCGTCCACTTCTACATTTCAACAAGTAGCTGATGAATGGTTATCACAATATGCTAATGAAGTAAAA
GTAAGCAGTGTCAGAGCACGCGAGAAAGCCATACATCATGCTATAGAACGCTTTAACAATAAACCAATACAAACTATCAA
TAAACATGAATATCAACGTTTTGTAAACGATATAAGCGCACAGTATAGCAAGAATTATGTTGATAGCATTATAACCTCTA
CAAATATGATATTTAAGTACGCATACGATATGAAATTAATAAGAATAATGCCTAGCGAGGATATTAAACGACCTAAAAAG
AAAACTAGTGTGGAAGAATTAGAAGATACTGAGATACATAAAAAGTTTCTTGAAAAAGATGAATTATTTCAATTCCTGGA
GGTTGCTAAAAATCACCATTCACCCCAAAACAGCTTTGAGGTGTTTTGTACATTAGCATATACAGGCATGCGTGCAGGTG
AATTATTGGCATTGAAATGGTCTGATATAGACTTTGAGAATAACACAATCAATATTACAAAGACTTATTACAATCCGAAT
AACAATAAAAAGCAATTTCAAATACTTACACCAAAAACTGAAAGCTCAATCGGAAAAATTCCAGTTGATCCTCATGTGAT
TAAATTACTTAAAAACTATAAAGTGGATGTTCAGGACACATGGAAAAATGGATTATATGTAGATAATAATTTCGTTTTTA
CTGATGTTAACGGCTACCCCCTCGTAATTAAAAAACTACAATTATGGATAAAAGCTATACTTAAAAAGACTGACATAACT
AATAAACAAATAAGCACTCATTCATTTCGTCATACTCATTGTGCATTACTTATAGAGGCTGGTGTGCATATTAAAGAAAT
ACAAGAACGTCTGCGCCACAAAGATATAAATACCACCATGAACATCTATGCTAAGATTACGAACTCATACAAAAAAGACG
CTTCCCAAAAGTTTAGTAAACTCATGGAAAACGTCTCAAAAGATTTATTTTAA

Protein sequence :
MASYEKRGSTWRYRISLGKDVKTGKYKYISNSGFKRKSDAKHHAEMVERQLRTGEYIAPSTSTFQQVADEWLSQYANEVK
VSSVRAREKAIHHAIERFNNKPIQTINKHEYQRFVNDISAQYSKNYVDSIITSTNMIFKYAYDMKLIRIMPSEDIKRPKK
KTSVEELEDTEIHKKFLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPN
NNKKQFQILTPKTESSIGKIPVDPHVIKLLKNYKVDVQDTWKNGLYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTDIT
NKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAB1912 YP_417371.1 integrase Not tested SaPIbov2 Protein 2e-172 100
SAOV_2065 YP_005737508.1 integrase Not tested SaPI2 Protein 3e-168 97
int ABJ97306.1 integrase Not tested SaPI2 Protein 1e-167 97
int NP_372552.1 integrase Not tested vSa4 Protein 1e-165 95
int NP_375136.1 hypothetical protein Not tested vSa4 Protein 1e-165 95