|
Name : SAB1904c (SAB1904c) Accession : YP_417363.1 Strain : Staphylococcus aureus RF122 Genome accession: NC_007622 Putative virulence/resistance : Unknown Product : mobile element-associated protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG5519 EC number : - Position : 2032079 - 2033788 bp Length : 1710 bp Strand : - Note : - DNA sequence : ATGGAAACAGGTAAAAGTGATGTACTTGATAAAATTGAAAAAATTAATAAAAAAGATAGTGCCTTACAAGAAATTATACC GAAAGGCTATGAAATTGAACATCATCAATGCGGTGTTGTCTTATATCAACTTATACCAAGTAAAAAAGAAGGCGAACCAG ATAAAAAGGTTTTTATCACAAATACAATCCCTCAAATTACTGAACGTTTTGAAGATATTGAGAGTAACGAAGTCAGCTTT AATATGCTTTTCTATGACAATAAAACGCCAGTAAATATAGCTGTGAGTGTCGAAGAAATTTCAGATAGTCGTCAACTCTT GAAATTGGTTAATAAAAAGCTAGATGTAACATCGTCAACATCTACTAAACTTGTTGACTATATTAATATATCTAAACGGT ATAATCCACCATTAAATGTTAAAGTTGCAACGCGTTTGGGGCATGTGAAAGGTTATTTTATTTATCCTTATCAAGAAGTA ATGAAAGACAGCAATGTCAAGTTGTTTAGCAATGATAAAGGGTTTCAAAAGTTAATAGACTCTTTTCGAAGTAAAGGAAC ACTACAAGGTTACTCTAAAAAGGTGTTTGCTCAAATAAAAGATTTACCAATGGTAATGGTTATGTTGTATGCATCTTTAG GCTCAGTTTTATTAAGAGAATTTGGATTACAACCCTTTATTGTAGAAATATCAGGTAGTACATCCACAGGTAAAACATTC ACACTCAACTTAGTATCAAGTGTTTGGGGAACCAGTGACCTTATTACGACATGGAGTTCTACTCAAAATAGTATTGAATC AATGGCGTCATTTTTGAACTCATTTCTAATGTTTAAAGATGATACGCGTAACACACATCCTAAGTTTGTTACCAGTGCCA CATATAACTTTTCTAGTGGTGAAAGTAAATCGAGAAGTAATATTAATTTAACGCTAAATGCTAAAAAAGAATGGCGAAAT ATTTTAATTTCTACTGGTGAATCATCTATCGCAAATATGGCTGATGAAAAAGCGGGTGTATCAGCACGTGTAGTTACACT ACAAGATCCACCATATCCAGATAATTTTGATTTTACCACATTAGACAAATCGTTTAGGGAGAACTATGGAACGTTAGGGT TGGCATTTATTAAACAATATGAGTCTAAAAAAGACGTGTATAAGAACGCTTTTGAGAGCTATCAACGGTATTTTAATCAA AAAGGTAGTAATGAAATCATGCAACGTTTAGGACGTGCCTTTGCGTTACTACAAGTTACCGGTGAGGTTTTGAATGATAT TGATGGGTTTGAACATGACCATTTTAAAATTATCGAACAAGCCTATGACAGCATGGTTAAAAACAATAAGACGATTGATA AACCTAAGCAACTGTTAGAGGAACTATTACAATATTTAGATGCGAATAGAAATAATATTGTAGGTGACGGTTATGATTCA GTAAATTACGGAGATGTTAAAGCGGTATATAAACATGATTTTCTTTGTATTAAAAACGAAACTGTTAAAAATAAATTAGG ACACGAAATGCAGACGATTACAGGGCAATGGGACAAAAAAGGTTATTTAATAAAAGATAAAAAAAGAATTCAAAAACAAG TAAAACATAAATCTCAAAGGCATCTGGGTTATGCGATTAAAAAAGAAATAATTGAAGAACTAGGATTTGATTTCTCGGTT TCACATAATCCATATACAGAAAGTTATTAG Protein sequence : METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVVLYQLIPSKKEGEPDKKVFITNTIPQITERFEDIESNEVSF NMLFYDNKTPVNIAVSVEEISDSRQLLKLVNKKLDVTSSTSTKLVDYINISKRYNPPLNVKVATRLGHVKGYFIYPYQEV MKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIKDLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTF TLNLVSSVWGTSDLITTWSSTQNSIESMASFLNSFLMFKDDTRNTHPKFVTSATYNFSSGESKSRSNINLTLNAKKEWRN ILISTGESSIANMADEKAGVSARVVTLQDPPYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQ KGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNKTIDKPKQLLEELLQYLDANRNNIVGDGYDS VNYGDVKAVYKHDFLCIKNETVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEIIEELGFDFSV SHNPYTESY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAB1904c | YP_417363.1 | mobile element-associated protein | Not tested | SaPIbov2 | Protein | 0.0 | 100 |
| SAV2021 | NP_372545.1 | hypothetical protein | Not tested | vSa4 | Protein | 0.0 | 99 |
| SA1828 | NP_375129.1 | hypothetical protein | Not tested | vSa4 | Protein | 0.0 | 99 |
| SAR0375 | YP_039832.1 | hypothetical protein | Not tested | SaPI4 | Protein | 0.0 | 99 |
| SAAV_0797 | YP_003281720.1 | pathogenicity island protein ORF 14/13 | Not tested | SaPIAv | Protein | 0.0 | 94 |
| SAB0351 | YP_415853.1 | pathogenicity island protein | Not tested | SaPIbov | Protein | 0.0 | 94 |
| rep | ABJ97298.1 | replication initiation protein | Not tested | SaPI2 | Protein | 0.0 | 93 |
| unnamed | AAP55244.1 | unknown | Not tested | SaPIbov2 | Protein | 0.0 | 81 |
