|
Name : SAB1874 (SAB1874) Accession : YP_417336.1 Strain : Staphylococcus aureus RF122 Genome accession: NC_007622 Putative virulence/resistance : Virulence Product : beta-hemolysin Function : - COG functional category : R : General function prediction only COG ID : COG3568 EC number : 3.1.4.3 Position : 2010354 - 2011346 bp Length : 993 bp Strand : + Note : - DNA sequence : ATGGTGAAAAAAACAAAATCCAATTCACTAAAAAAAGTTGCAACACTTGCATTAGCAAATTTATTATTAGTTGGTGCACT TACTGACAATAGTGCCAAAGCCGAATCTAAGAAAGATGATACTGATTTGAAGTTAGTTAGTCATAACGTTTATATGTTAT CGACGGTTTTGTATCCAAACTGGGGGCAATATAAACGCGCTGATTTAATCGGACAATCTTCTTATATTAAAAATAATGAT GTCGTAATATTCAATGAAGCATTTGATAATGGTGCATCAGACAAATTATTAAGTAATGTAAAAAAAGAATATCCTTACCA AACACCTGTACTCGGTCGTTCTCAATCAGGTTGGGACAAAACTGAAGGTAGCTACTCATCAACTGTTGCTGAAGATGGTG GCGTAGCGATTGTAAGTAAATATCCTATTAAAGAGAAAATCCAGCATGTTTTCAAAAGCGGTTGTGGATTCGATAATGAT AGCAACAAAGGCTTTATTTATACAAAAATAGAGAAAAATGGTAAGAACGTTCACGTTATCGGTACACATACACAATCTGA AGATTCTCGTTGTGGTGCTGGACATGATCGAAAAATTAGAGCTGAACAAATGAAAGAAATCAGTGACTTTGTTAAAAAGA AAAATATCCCTAAAGATGAAACGGTATATATAGGTGGCGACCTTAATGTTAATAAAGGCACTCCAGAGTTCAAAGATATG CTTAAAAACTTGAATGTAAATGATGTTCTATATGCAGGTCATAATAGCACATGGGACCCTCAATCAAATTCAATTGCGAA ATATAATTACCCTAATGGTAAACCAGAACATTTAGACTATATATTTACAGATAAAGATCATAAACAACCAAAACAATTAG TCAATGAAGTTGTGACTGAAAAACCTAAGCCATGGGATGTATATGCGTTCCCATATTACTATGTTTACAATGATTTTTCA GATCATTACCCAATCAAAGCCTATAGTAAATAG Protein sequence : MVKKTKSNSLKKVATLALANLLLVGALTDNSAKAESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNND VVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDND SNKGFIYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDM LKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFS DHYPIKAYSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlb | NP_646757.1 | truncated beta-hemplysin | Not tested | ¥ÕSa3 | Protein | 3e-125 | 99 |
| truncated-hlb | NP_372527.1 | hypothetical protein | Not tested | ¥ÕSa3 | Protein | 2e-124 | 99 |
| hlb | NP_375112.1 | hypothetical protein | Not tested | ¥ÕSa3 | Protein | 7e-125 | 99 |
| unnamed | CAA70683.2 | sphingomyelinase-c | Virulence | LIPI-2 | Protein | 6e-72 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SAB1874 | YP_417336.1 | beta-hemolysin | VFG1798 | Protein | 2e-139 | 99 |
| SAB1874 | YP_417336.1 | beta-hemolysin | VFG0674 | Protein | 4e-72 | 56 |
