Gene Information

Name : lukE (SAB1687c)
Accession : YP_417150.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : leukotoxin E subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1831611 - 1832546 bp
Length : 936 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAAGAAAAAAATGTTAGCTGCAACTTTGTCAGTTGGATTGATAGCACCTTTAGCATCTCCGATTCAAGAATCTAG
AGCAAATACTAATATTGAAAATATTGGTGATGGTGCTGAAGTAATCAAACGAACGGAGGGTGTAAGTAGTAAGAAATGGG
GCGTTACTCAAAATGTTCAATTTGACTTTGTAAAAGATAAAAAATATAACAAAGACGCTTTAATTGTTAAAATGCAAGGT
TTTATCAATTCCAGAACTTCATTTTCAGATGTGAAGGGTAGTGGATATGAATTAACTAAACGAATGATTTGGCCATTTCA
ATATAATATAGGACTGACGACTAAAGATCCAAATGTTAGCTTAATCAATTACCTTCCTAAAAACAAAATAGAAACTACAG
ATGTTGGTCAAACATTAGGATATAACATTGGAGGTAATTTCCAGTCAGCACCATCTATAGGTGGCAATGGCTCATTTAAT
TATTCTAAAACAATTAGTTATACCCAAAAGAGTTATGTCAGTGAAGTAGACAAGCAAAACTCAAAATCTGTTAAATGGGG
TGTTAAAGCAAACGAATTTGTTACGCCTGATGGTAAAAAATCTGCGCATGATAGATATTTATTCGTACAAAGTCCAAATG
GTCCGTCAGGTTCAGCAAGAGAATATTTTGCTCCTGATAATCAATTGCCACCATTAGTTCAAAGTGGCTTTAATCCATCA
TTTATCACTACACTATCACATGAAAAAGGTTCAAGTGATACGAGTGAATTTGAAATTTCATATGGTAGAAACTTAGATAT
TACATATGCGACTTTATTCCCTAGAACTGGTATTTACGCAGAAAGAAAGCATAATGCATTTGTAAATAGAAACTTTGTAG
TTAGATATGAAGTTAACTGGAAAACACATGAAATTAAAGTGAAAGGACATAATTAA

Protein sequence :
MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEGVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQG
FINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTKDPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFN
YSKTISYTQKSYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFVQSPNGPSGSAREYFAPDNQLPPLVQSGFNPS
FITTLSHEKGSSDTSEFEISYGRNLDITYATLFPRTGIYAERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lukE NP_372344.1 leukotoxin S-subunit Virulence vSa¥â Protein 5e-142 99
lukE NP_374927.1 leukotoxin LukE Virulence vSa¥â Protein 5e-142 99
lukE YP_001332753.1 leukocidin LukE precursor Virulence vSa¥â Protein 5e-142 99
lukE YP_494460.1 leukotoxin LukE Virulence vSa¥â Protein 5e-142 99
lukE YP_186708.1 leukotoxin LukE Virulence vSa¥â Protein 5e-142 99
lukE NP_646585.1 leukotoxin LukE Virulence vSa¥â Protein 5e-142 99
SAKOR_01768 YP_008491956.1 Leukocidin S subunit lukE Virulence vSa¥â Protein 5e-142 99
SAOV_1909 YP_005737354.1 leukocidin chain lukM precursor Virulence ¥ÕSa3 Protein 1e-109 74
lukS NP_646196.1 Panton-Valentine leukocidin chain S precursor Virulence ¥ÕSa2 Protein 2e-100 69
lukS-PV YP_494079.1 Panton-Valentine leukocidin, LukS-PV Virulence ¥ÕSa2 Protein 2e-100 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lukE YP_417150.1 leukotoxin E subunit VFG1273 Protein 5e-106 71
lukE YP_417150.1 leukotoxin E subunit VFG1277 Protein 7e-101 69
lukE YP_417150.1 leukotoxin E subunit VFG1274 Protein 3e-90 68