|
Name : SAB1032c (SAB1032c) Accession : YP_416516.1 Strain : Staphylococcus aureus RF122 Genome accession: NC_007622 Putative virulence/resistance : Virulence Product : superantigen-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 1111640 - 1112365 bp Length : 726 bp Strand : - Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation DNA sequence : ATGAAAAAGAACATCATGAATAAATTAGTTTTATCAACAGCATTGTTACTTTTAGGAACCACATCAACACAACTTCCTAA AACACCAATCAGTTTTTCATCTGAAGCAAAAGCCTATAATATCAGTGAAAACGAGACTAATATCAATGAACTAATCAAAT ATTACACTCAGCCGCATTTTTCACTTTCAAATAAATGGTTATGGCAAAAGCCCAATGGTAGCATTCATGCAACATTGCAA ACGTGGGTTTGGTATAGTCATATTCAAGTGTTTGGTTCCGAGAGTTGGGGAAACATTAATCAGTTGAGAAATAAATACGT TGATATATTTGGAACTAAAGATGAGGACACAGTTGAAGGTTACTGGACTTATGATGAAACATTTACTGGTGGTGTTACGC CAGCAGCTACTTCATTTGATAAGCCTTATAGACTATTTTTAAAATATAGTGATAAACAACAAACTATCATCGGTGGACAT GAATTTTACAAAGGAAATAAACCAGTATTAACTTTAAAAGAATTAGATTTCCGTATTCGTCAAACATTAATAAAGAATAA AAAGTTATATAACGGAGAATTTAATAAAGGTCAAATTAAGATAACTGCTGATGGAAATAATTACACGATTGATTTAAGTA AAAAATTAAAATTAACTGATACAAACCGTTATGTTAAAAATCCTAAAAATGCACAAATTGAAGTCATACTCGAAAAATCT AACTAA Protein sequence : MKKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHFSLSNKWLWQKPNGSIHATLQ TWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSFDKPYRLFLKYSDKQQTIIGGH EFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPKNAQIEVILEKS N |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| MW1049 | NP_645866.1 | superantigen-like protein | Not tested | vSa¥ã | Protein | 2e-96 | 99 |
| SAV1168 | NP_371692.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-96 | 99 |
| SA1011 | NP_374284.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-96 | 99 |
| SAKOR_01089 | YP_008491277.1 | Exotoxin | Virulence | vSa¥ã | Protein | 2e-96 | 99 |
| SACOL1180 | YP_186043.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-96 | 98 |
| SAUSA300_1061 | YP_493759.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 2e-96 | 98 |
| SAV1167 | NP_371691.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-64 | 70 |
| SAKOR_01088 | YP_008491276.1 | Exotoxin | Virulence | vSa¥ã | Protein | 2e-65 | 70 |
| SA1010 | NP_374283.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-65 | 70 |
| SACOL1179 | YP_186042.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-65 | 70 |
| MW1048 | NP_645865.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-65 | 70 |
| SAUSA300_1060 | YP_493758.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 1e-65 | 70 |
| MW1047 | NP_645864.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 5e-57 | 63 |
| SACOL1178 | YP_186041.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 4e-57 | 63 |
| SAUSA300_1059 | YP_493757.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 4e-57 | 63 |
| SAKOR_01087 | YP_008491275.1 | Exotoxin | Virulence | vSa¥ã | Protein | 2e-57 | 63 |
| SAV1166 | NP_371690.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 5e-57 | 62 |
| SA1009 | NP_374282.1 | superantigen-like protein | Virulence | vSa¥ã | Protein | 5e-57 | 62 |
