Gene Information

Name : hla (SAB1027c)
Accession : YP_416511.1
Strain : Staphylococcus aureus RF122
Genome accession: NC_007622
Putative virulence/resistance : Virulence
Product : alpha-hemolysin precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1107592 - 1108551 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACACGTATAGTCAGCTCAGTAACAACAACATTATTGCTAGGTTCCATATTAATGAATCCTGTCGCTAATGCCGC
AGATTCTGATATTAATATTAAAACCGGTACTACAGATATTGGAAGCAATACTACAGTAAAAACAGGTGATTTAGTCACTT
ATGATAAAGAAAATGGCATGCACAAAAAAGTATTTTATAGTTTTATCGATGATAAAAATCACAATAAAAAACTGCTAGTT
ATTAGAACGAAAGGTACCATTGCTGGTCAATATAGAGTTTATAGCGAAGAAGGTGCTAACAAAAGTGGTTTAGCCTGGCC
TTCAGCCTTTAAGGTACAGTTGCAACTACCTGATAATGAAGTAGCTCAAATATCTGATTACTATCCAAGAAATTCGATTG
ATACAAAAGAGTATATGAGTACTTTAACTTATGGATTCAACGGTAATGTTACTGGTGATGATACAGGAAAAATTGGTGGC
CTTATTGGTGCAAATGTTTCGATTGGTCATACACTCAAATATGTTCAACCGGATTTCAAAACAATTTTAGAGAGCCCAAC
TGATAAAAAAGTAGGCTGGAAAGTGATATTTAACAATATGGTGAATCAAAATTGGGGACCATATGATAGAGATTCTTGGA
ACCCGGTATATGGCAATCAACTTTTCATGAAAACTAGAAATGGCTCTATGAAAGCAGCAGATAACTTCCTTGATCCTAAC
AAAGCAAGTTCTCTATTATCTTCAGGGTTTTCACCAGACTTCGCTACAGTTATTACTATGGATAGAAAAGCATCCAAACA
ACAAACAAATATAGATGTAATATACGAACGAGTTCGTGATGACTACCAATTGCATTGGACTTCAACAAATTGGAAAGGTA
CCAATACTAAAGATAAATGGACAGATCGTTCTTCAGAAAGATATAAAATCGATTGGGAAAAAGAAGAAATGACAAATTAA

Protein sequence : 
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLV
IRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGG
LIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPN
KASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1044 NP_645861.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 100
SAV1163 NP_371687.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 99
SA1007 NP_374279.1 alpha-hemolysin Virulence vSa¥ã Protein 5e-145 99
hlY YP_186036.1 alpha-hemolysin precursor Virulence vSa¥ã Protein 1e-144 99
SAUSA300_1058 YP_493756.1 alpha-hemolysin Not tested vSa¥ã Protein 1e-144 99
SAKOR_01084 YP_008491272.1 Leukocidin F subunit Virulence vSa¥ã Protein 6e-145 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hla YP_416511.1 alpha-hemolysin precursor VFG1293 Protein 2e-145 100