Gene Information

Name : ribD (BAB1_0789)
Accession : YP_414222.1
Strain :
Genome accession: NC_007618
Putative virulence/resistance : Unknown
Product : cytidine/deoxycytidylate deaminase zinc-binding subunit
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 770658 - 771779 bp
Length : 1122 bp
Strand : +
Note : -

DNA sequence :
ATGGGCGCCAGCGAATTTCCGCGTTCAAAAGCGACATTGAATGATCTGCGCTTCATGGAAGCGACGATCCGTTATGCGCG
CCGTCACAAGGGGCTGACTGGCACCAATCCTTCGGTCGGCACGATTATCGTCAAGGACGGTGTCATTGTCGGGCGCGGCG
TGACGGCATTGGGCGGAAGGCCCCATGCCGAGCCGCAGGCTTTGGCTGAAGTGGGTGAGGCGGCGCGAGGGGCGACGGCC
TATGTGACGCTGGAGCCCTGCGCGCATCATGGGCGCACACCGCCTTGCGCGGAGGCGCTGGTGCGCTCGGGCGTCGCGCG
TGTCGTGGTTGCCGCAACCGATCCGGACGAGCGTGTCAGCGGAAAAGGCTTTGCCATTCTGCGCGAAGCGGGCATTGAAG
TCGTGCCGGGCATTTTGTCCGAACAGGCTGCCGACGACCTTGCGGGCTATCTGAATCGATCTGCGAGGAAACGCCCGGAA
GTGATTCTGAAACTTGCGCTTTCTGCCGATGGCATGATCGGCCGGAAAGGTGCGGGGCAGGTGGCTATCACCGGCCCAGT
TTCGCGCGCGCAGTCACATATTCTGCGCGCACAGGCCGATATTATCCTGATCGGTATCGAAACAGCCCTTGCCGATGATC
CGGTTTTGAATTGCCGTCTGCCGGGGCTGGAACAGCGTTCGCCCGTTCGTGTCGTGCTGGATGGCGGGTTGCGTCTGCCG
CTTTCCTCAAGGCTGGTGCGCTCTGCCGATACGCAGCCCCTGTGGGTTGCCTGCGGGGAGGAAGCCCCTGACGAGCGCCG
CGCCGCGCTGGGTGCTGCGGGCTGCCGTATCCTTGCAACCGAGACGCATGATGGCCGCATCGCCCTGCCGGAATTGCTGG
ATGATCTTGCCGCGCAGGGCATTGCTTCTGTTCTCGTTGAGGGCGGGGCGGGCGTCGCCAAAAGCTTTCTGGATGAAAAA
CTCGTGGACCGGCTGATCATCTTCCGTTCGCCATTGGTGATCGGCGCGGCGGATGGGGTTGCCGTTGAGGGACTGGAAAC
CCATATCGCAAGCGAATTCAAAATTCTGAGGCGGATGCGTTACGCAGATGATGCCTGTGCGGAATATGTAAGGAACACGT
GA

Protein sequence :
MGASEFPRSKATLNDLRFMEATIRYARRHKGLTGTNPSVGTIIVKDGVIVGRGVTALGGRPHAEPQALAEVGEAARGATA
YVTLEPCAHHGRTPPCAEALVRSGVARVVVAATDPDERVSGKGFAILREAGIEVVPGILSEQAADDLAGYLNRSARKRPE
VILKLALSADGMIGRKGAGQVAITGPVSRAQSHILRAQADIILIGIETALADDPVLNCRLPGLEQRSPVRVVLDGGLRLP
LSSRLVRSADTQPLWVACGEEAPDERRAALGAAGCRILATETHDGRIALPELLDDLAAQGIASVLVEGGAGVAKSFLDEK
LVDRLIIFRSPLVIGAADGVAVEGLETHIASEFKILRRMRYADDACAEYVRNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-29 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-29 41