|
Name : Nmul_A0631 (Nmul_A0631) Accession : YP_411330.1 Strain : Nitrosospira multiformis ATCC 25196 Genome accession: NC_007614 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 717475 - 719487 bp Length : 2013 bp Strand : - Note : - DNA sequence : ATGCCCGCGCCCAAACTCAACATAAGGACGGTTATTGCATTCGGGCATGATGTTGTAGCTGCCGCCATCGCCTGGTCCCT GGCTTATCTGTTCCGCTTCAATTTCGAGATACCCTTCGTTTATCTGGCATCTTTGGAAGAGATTCTGCCGTGGGTGGTCC CGATACACGCAGCAGCCTTCTTATTCTTTGGCCTGTATCGTGGACTCTGGCATTACGCAAGCCTGCCCGATTTGCGGCGC ATCCTGTTTGCTGTATCCGCTTCGGCTGCAGCCGTCCCATTGGTGCTATACATGTTGCAGATACTGGTCGGTGTCCCCAG AACTGTGCTGATACTGGCCCCCATCCTGCTGCTGTTCATCATGGGAAGCAGCCGTCTCGCTTACCGGTTCTGGAAAGAAC ACCGGCTTTACGGCCGCAGTAAAACGGGAGGCAATCTCGTTCTGGTGATAGGAGCAAGTGATGCTGCTGTCGGCTTGGTA AAAGAGCTGGCGCGCAATGTGGAATGGCGCGTCGCGGGTTTCCTTGACGACGATCCGGCCAAGCGGGGGCTGATGCTGCA CGGATTCAAAGTACTGGGCCGCATCAACGATCTGCCGGAGGTAGCCCGGAAACTGGGTGTCGCGCATGCCATTATCGCTC TCACCTCCTCCGCTTCAGATCGCCGCAAATCCTATCGCACCCACTCTGATCGCCGCCGCCCCGACCGCCTCCTGCGCGAC CGACGTCGAGCCTTGCAACTGTGTGCAGCGGCAGGGGTAAAGGCCTTGATCGTCCCTTCCTATAACGACCTGGTGAGCGG CAACATCAAGGTGTCACAAATCCGGACAGTCGAGCCTGAAGATTTGCTGGGGCGGGATCCTGTCGTGCTGGATAACGATG GACTGCACGATTTACTGACGGGAAAAACGGTATTGGTTACAGGCGCGGGGGGTTCGATTGGATCGGAGTTATGCCGACAG ATCGTCAAATTCGCACCGGCTCAACTGGTACTGTTTGAATTGAATGAATTTGCGCTGTACAGCATAGAGCAGGAATTCCA GGCCGATTTTCCAGAGATTCCCATGATATTCGCCATTGGCGATGTCAAGGATGAAGCGCGGCTATCACAGGTATTCCTGC AATACCGGCCGGCTATTGTGTTTCATGCGGCTGCCTACAAGCATGTGCCCCTGATGGAACAGGAAAATGCATGGCAGGCG GTGCTGAACAACGTGCGGGGAACCTATGTCCTGGCGCAAACCGCCATCCGGTACGGGGTGGAGAAATTCGTCCTGATTTC GACCGACAAGGCCGTCAACCCGACCAATGTCATGGGCGCGAGTAAACGCCTGGCTGAAATGGTATGCCAGGCGTTACAGC AGTCGATTGCATCTCCTGACAGTCCCACCGAAAACGCCTCCGGCAAAATTGTTCTGGGCAGCAGGCTTGAAAGGAGGCAG GAGCCACGATTCGTCATGGTGCGTTTCGGTAATGTGCTGGGCAGTGCGGGCAGCGTGATTCCCAAATTCAGGGAGCAGAT TGAAAAAGGGGGACCGATAACGGTAACGCACTCGGAAATCACCCGTTATTTCATGTCCATACCTGAGGCAGCACAGTTGG TTCTACAGGCCGGCTTGATGGGCGGCAAGCGGCGGGGGGGGGAAATTTTCGTGCTGGATATGGGCGAACCGATTAAAATC GCCGATCTTGCGCGAGATCTGATTCGTCTTTCCGGATTGAGCGAGGATGAAATAAAAATTGTTTACAATGGCTTGCGCCC CGGCGAAAAACTCTACGAAGAACTGTTGGCGGATGACGAAAATACGCTTCCCACGCCCCACCCCAAATTGCGTATCGCGC AAGCACGTCAGGTAGACAGAAAATGGCTGACAGCTCTGCTGGCGTGGCTTGAGGAGCATCCCGCCCTGAGCGACGAAGAG GTCAAGCGGGAGCTGCCCAGATGGGTTCCGGAATACGTGAGCGCGGAATCAGTTATCCCCGTTTCCCAGGTTCGCGAGTC TCGTATCGCATAG Protein sequence : MPAPKLNIRTVIAFGHDVVAAAIAWSLAYLFRFNFEIPFVYLASLEEILPWVVPIHAAAFLFFGLYRGLWHYASLPDLRR ILFAVSASAAAVPLVLYMLQILVGVPRTVLILAPILLLFIMGSSRLAYRFWKEHRLYGRSKTGGNLVLVIGASDAAVGLV KELARNVEWRVAGFLDDDPAKRGLMLHGFKVLGRINDLPEVARKLGVAHAIIALTSSASDRRKSYRTHSDRRRPDRLLRD RRRALQLCAAAGVKALIVPSYNDLVSGNIKVSQIRTVEPEDLLGRDPVVLDNDGLHDLLTGKTVLVTGAGGSIGSELCRQ IVKFAPAQLVLFELNEFALYSIEQEFQADFPEIPMIFAIGDVKDEARLSQVFLQYRPAIVFHAAAYKHVPLMEQENAWQA VLNNVRGTYVLAQTAIRYGVEKFVLISTDKAVNPTNVMGASKRLAEMVCQALQQSIASPDSPTENASGKIVLGSRLERRQ EPRFVMVRFGNVLGSAGSVIPKFREQIEKGGPITVTHSEITRYFMSIPEAAQLVLQAGLMGGKRRGGEIFVLDMGEPIKI ADLARDLIRLSGLSEDEIKIVYNGLRPGEKLYEELLADDENTLPTPHPKLRIAQARQVDRKWLTALLAWLEEHPALSDEE VKRELPRWVPEYVSAESVIPVSQVRESRIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-80 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 4e-76 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Nmul_A0631 | YP_411330.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-86 | 43 |
| Nmul_A0631 | YP_411330.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 4e-71 | 42 |
