Gene Information

Name : Nmul_A2405 (Nmul_A2405)
Accession : YP_413086.1
Strain : Nitrosospira multiformis ATCC 25196
Genome accession: NC_007614
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2742706 - 2743551 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence :
GTGAAGGCCATTGCAGACACCATGGGTGTGGCGCGCTCCCGTCTTGTGGAACGGATGAAGCCGCAGGAAAAGTCTTTTCG
TTGCCGCTACAACAAGGCTGATGATGCCTGGCTGTTGCCCTTGATCCGCGAAATTGTGGATTGCCGCGCGACCTACGGAT
ACAGAAGGATTTGCGCTCTCCTTAACCGCAAACTGGAGAGAATGGGAAAGCCTGCTGTCAATCACAAGCGGGTCTATCGC
ATCATGCGCCAGAATGGCCTGCTGGCCCGATATACGGGCAAACAGCGCGTGCTGTCTCATGAAGGCAAGGTCATTACCTT
GCGTTCCAATTTGCGCTGGTGTTCGGATGGTTTTGAGATTCCCTGCTGGAATGGGCAAGTAGTGCGTGTTGCCTTCGCCC
TGGATTGCTGTGATCGTGAAGTCATCAGCCATGTTGCCACCACTGGCGGCATTACTGGGGAAATGGTGCGCGATCTGATG
ACTGAATCCGTTGAGCGGCGCTTCGGCACCGTTGACCTGCTCCCACACAGGGTGGAGTGGCTCAGCGACAATGGCAGTTG
TTACACCGCCAGCGAGACAACTGCTTTTGCAAAGGATATGGGCTTCATCAGCTGTTTTACTCCCGTCAGAAGCCCCGAAT
CCAACGGCATGGCCGAGGCCTTCGTCAAAACCTTCAAGCGGGATTACGTCTATGTCCATGATCGTCCCGACGCAAAAACC
GTAATAGCGCAGCTTGCCCAATGGTTCGAGGATTACAATGAATACCATCCTCACAAGGGGCTGAAGATGAAGTCACCACG
ACAATTCATCCGCAGCCAGTTACTAACCGCATCTTGTCCGGTTTAA

Protein sequence :
MKAIADTMGVARSRLVERMKPQEKSFRCRYNKADDAWLLPLIREIVDCRATYGYRRICALLNRKLERMGKPAVNHKRVYR
IMRQNGLLARYTGKQRVLSHEGKVITLRSNLRWCSDGFEIPCWNGQVVRVAFALDCCDREVISHVATTGGITGEMVRDLM
TESVERRFGTVDLLPHRVEWLSDNGSCYTASETTAFAKDMGFISCFTPVRSPESNGMAEAFVKTFKRDYVYVHDRPDAKT
VIAQLAQWFEDYNEYHPHKGLKMKSPRQFIRSQLLTASCPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39284.1 hypothetical protein Not tested LPA Protein 5e-52 53
unnamed AAL67379.1 transposase-like protein Not tested PAI II CFT073 Protein 8e-51 52
SF2985 NP_708759.1 insertion element IS2 transposase InsD Not tested SHI-1 Protein 3e-50 52
tnpF AAD44739.1 TnpF Not tested SHI-2 Protein 2e-50 52
ECO111_3773 YP_003236109.1 putative IS2 transposase InsAB Not tested LEE Protein 1e-49 52
insD YP_002414033.1 insertion element IS2 transposase InsD Not tested Not named Protein 8e-51 52
S3189 NP_838472.2 insertion element IS2 transposase InsD Not tested SHI-1 Protein 5e-49 52
S4050 NP_839218.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 3e-50 52
SF3708 NP_709447.1 IS2 transposase TnpB Not tested SHI-2 Protein 3e-50 52
SF3721 NP_709460.1 IS2 transposase TnpB Not tested SHI-2 Protein 3e-50 52
S4061 NP_839230.2 insertion element IS2 transposase InsD Not tested SHI-2 Protein 2e-50 52
aec49 AAW51732.1 Aec49 Not tested AGI-3 Protein 6e-49 51
c5197 NP_757045.1 transposase insD Not tested PAI II CFT073 Protein 2e-35 44
unnamed CAC39283.1 hypothetical protein Not tested LPA Protein 1e-48 44
insD YP_854263.1 IS2 transposase Not tested PAI I APEC-O1 Protein 5e-37 43
insD AAZ04432.1 IS2 transposase Not tested PAI I APEC-O1 Protein 4e-37 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Nmul_A2405 YP_413086.1 integrase catalytic subunit VFG0649 Protein 1e-50 52
Nmul_A2405 YP_413086.1 integrase catalytic subunit VFG1732 Protein 4e-51 52
Nmul_A2405 YP_413086.1 integrase catalytic subunit VFG0621 Protein 1e-50 52
Nmul_A2405 YP_413086.1 integrase catalytic subunit VFG0608 Protein 1e-50 52