Gene Information

Name : fliQ (Nmul_A1356)
Accession : YP_412051.1
Strain : Nitrosospira multiformis ATCC 25196
Genome accession: NC_007614
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 1543699 - 1543968 bp
Length : 270 bp
Strand : +
Note : with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGACACCTGAAAGCGTAATGACACTCGGCCAGAAAGCAATGGAAGTTACCTTGATGGTTTCCGCTCCCTTGTTACTGGC
CGCACTCGCCACCGGATTGCTGGTCAGCATCTTTCAGGCTGCTACCCAGATCAATGAGATGACTCTGTCTTTCATTCCCA
AACTCGTGGTCCTGTTTGCCATGCTGGTGCTTGCAGGCCCGTGGATGCTTTCGGTGCTGCTCGACTATATGAGGCAGGTG
CTGGAAGGAATTCCCGGAGTGATCGGATAG

Protein sequence :
MTPESVMTLGQKAMEVTLMVSAPLLLAALATGLLVSIFQAATQINEMTLSFIPKLVVLFAMLVLAGPWMLSVLLDYMRQV
LEGIPGVIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaQ YP_217808.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 0.004 42
spaQ NP_457283.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 0.004 42
spaQ NP_806492.1 virulence-associated secretory protein Virulence SPI-1 Protein 0.004 42
spaQ NP_461810.1 needle complex export protein Virulence SPI-1 Protein 0.004 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_412051.1 flagellar biosynthesis protein FliQ VFG2339 Protein 8e-17 67
fliQ YP_412051.1 flagellar biosynthesis protein FliQ VFG2495 Protein 2e-13 66
fliQ YP_412051.1 flagellar biosynthesis protein FliQ VFG2015 Protein 2e-11 52
fliQ YP_412051.1 flagellar biosynthesis protein FliQ VFG1260 Protein 5e-10 45
fliQ YP_412051.1 flagellar biosynthesis protein FliQ VFG0550 Protein 0.001 42