Gene Information

Name : ugd (SBO_0857)
Accession : YP_407355.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 870640 - 871806 bp
Length : 1167 bp
Strand : -
Note : Code: M; COG: COG1004

DNA sequence : 
ATGAAAATAACAATTTCAGGAACAGGTTATGTTGGTCTTTCAAATGGTATTCTGATTGCGCAAAACCACGAAGTGGTTGC
ACTGGATATCGTTCAGGCCAAAGTGGACATGCTTAACAAGAGGCAGTCACCGCTTGTTGATAAGGAGATTGAAGAGTATC
TGGCGACTAAAGATCTCAATTTCCGCGCTACGACAGATAAGTATGACGCGTATAAAAATGCCGATTACGTTATTATTGCC
ACACCTACCGATTATGATCCGAAAACAAATTATTTTAATACCTCAAGCGTGGAAGCGGTCATTCGTGATGTGACAGAAAT
TAATCCCAACGCGGTAATGATTATAAAATCAACTATCCCTGTTGGTTTTACAGAGTCCATTAAAGAACGTTTTGGTATTG
AAAATGTGATCTTTTCGCCTGAGTTTTTGCGTGAAGGTAAAGCACTTTATGATAACTTACACCCATCACGCATTGTGATT
GGCGAGCAGTCTGAACGCGCTAAACGTTTTGCTGCGTTATTACAGGAAGGCGCCATTAAGCAAGACATACCAACATTGTT
TACTGACTCAACCGAGGCTGAGGCGATTAAACTTTTTGCGAACACTTATCTGGCGATGCGTGTAGCGTATTTCAATGAAC
TTGATAGTTATGCTGAAAGCCTGGGACTTAATTCACGCCAGATTATTGAGGGCGTATGCCTTGACCCGCGTATCGGTAAT
CACTACAACAACCCGTCATTCGGTTATGGTGGTTATTGTCTGCCGAAAGATACTAAGCAGTTACTGGCAAATTACCAGTC
TGTGCCGAATAACCTGATCTCGGCAATTGTTGACGCCAACCGCACGCGCAAAGATTTTATTGCCGATTCTATCCTTGCAC
GTAAACCGAAAGTTGTTGGCGTCTATCGTTTGATTATGAAGAATGGTTCAGACAATTTTCGTGCTTCCTCGATTCAGGGT
ATTATGAAGCGAATCAAGGCGAAAGGTGTGCCTGTAATCGTTTATGAGCCAGCTATGAAAGAGGACGATTTTTTCCGGTC
GCGCGTGGTACGTGATCTGGATGCGTTCAAACAAGAAGCTGATGTTATTATTTCTAACCGTATGTCTGCCGATCTGGCTG
ATGTAGCAGATAAAGTTTATACGCGCGACTTGTTTGGCAATGATTAA

Protein sequence : 
MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKRQSPLVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIA
TPTDYDPKTNYFNTSSVEAVIRDVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
GEQSERAKRFAALLQEGAIKQDIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNSRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAIVDANRTRKDFIADSILARKPKVVGVYRLIMKNGSDNFRASSIQG
IMKRIKAKGVPVIVYEPAMKEDDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 4e-91 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_407355.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 2e-100 53