|
Name : kdpE (SBO_0556) Accession : YP_407074.1 Strain : Shigella boydii Sb227 Genome accession: NC_007613 Putative virulence/resistance : Virulence Product : DNA-binding transcriptional activator KdpE Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 571962 - 572639 bp Length : 678 bp Strand : - Note : transcriptional effector; response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport DNA sequence : GTGACAAACGTTCTGATTGTTGAAGATGAACAGGCTATTCGTCGCTTTCTGCGCACGGCGCTGGAGGGCGACGGGATGCG CGTCTATGAGGCCGAAACGCTGCAACGCGGCTTGCTGGAAGCGGCTACCCGTAAGCCAGATTTGATTATTCTCGATCTCG GCCTGCCCGATGGTGATGGGATTGAGTTTATCCGCGACCTGCGCCAGTGGAGCGCGGTGCCGGTGATTGTGCTTTCCGCA CGCAGCGAAGAGAGCGACAAAATCGCCGCGCTGGATGCCGGAGCGGATGATTATCTGAGTAAGCCGTTTGGCATTGGCGA ATTGCAGGCCCGTCTGCGCGTCGCTTTACGCCGCCACTCCGCTACCGCCGCGCCCGATCCGCTGGTGAAATTTTCCGATG TTACCGTCGATTTAGCCGCCCGCGTGATTCACCGGGGTGAGGAAGAGGTGCATCTCACACCAATTGAGTTCCACCTGCTG GCGGTGCTGCTCAACAATGCCGGAAAAGTACTCACCCAGCGCCAGCTCCTTAACCAGGTGTGGGGGCCAAACGCGGTCGA ACACAGTCACTATTTGCGTATTTATATGGGACATCTGCGACAAAAACTGGAACAGGATCCCGCCCGCCCACGCCATTTCA TTACTGAAACCGGTATTGGCTATCGGTTTATGCTTTGA Protein sequence : MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSA RSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFHLL AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRFML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0031 | YP_251946.1 | hypothetical protein | Not tested | SCCmec | Protein | 1e-25 | 43 |
| kdpE | YP_039536.1 | response regulator protein | Not tested | Type-II SCCmec | Protein | 3e-25 | 42 |
| kdpE | NP_370594.1 | transcriptional regulator kdpE | Not tested | Type-II SCCmec | Protein | 3e-25 | 42 |
| kdpE | NP_373306.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 3e-25 | 42 |
| kdeP | YP_190033.1 | DNA-binding response regulator KdeP | Not tested | Type-II SCCmec | Protein | 3e-25 | 42 |
| kdpE | BAA82188.1 | KDP operon transcriptional regulatory protein KdpE | Not tested | Type-II SCCmec | Protein | 2e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| kdpE | YP_407074.1 | DNA-binding transcriptional activator KdpE | VFG1390 | Protein | 2e-29 | 41 |
