Gene Information

Name : iucC (SBO_4339)
Accession : YP_410583.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 4389274 - 4391016 bp
Length : 1743 bp
Strand : +
Note : Code: Q; COG: COG4264

DNA sequence :
ATGAATCACAAGGACTGGGATTTTGTTAACCGTCGGCTGGTGGCAAAAATGTTGTCTGAGATGGAGTATGAGCAGGTTTT
CCACGCGGAATCTCAGGGCGATGACCACTACTGCATTAACCTGCCGGGAGCACAATGGCGCTTCATCGCTGAACGTGGTA
TCTGGGGCTGGCTGTGGATTGATGCCCAAACGTTGCGCTGCACGGACGAACCAGTACTGGCGCAGACGCTGCTGATGCAG
CTAAAGCCGGTGCTGTCAATGAGTGATGCCACTGTTGCAGAGCATATGCAGGATTTGTATGCCACGCTACTGGGCGACCT
GCAACTGCTGAAGGCCCGTCGCGGACTGAGTGCCAGTGACCTGATTAATCTTGATGCCGATCGTCTGCAATGCCTGCTGA
GCGGTCATCCTAAATTCGTTTTTAATAAAGGTCGCCGTGGCTGGGGCAAAGAGGCGCTGGAACGATATGCGCCAGAGTAT
ACCAACACCTTCAGACTGCACTGGCTGGCGGTAAAACGTGAACATATGATCTGGCGCTGCGATAACGATCTGGATATTCA
GCAGTTGTTGACTGCCGCAATGGATCCGCAGGAGTTTACACGCTTCAGTCAGGTCTGGCAGGAAAACGGGCTGGATCACA
ACTGGCTACCGCTGCCGGTACATCCGTGGCAGTGGCAGCAAAAAATCGCCACAGACTTCATCGCTGATTTTGTCGAAGGC
AGGATGGTGTCTCTCGGCGAGTTTGGCGACCAGTGGCTCGCCCAGCAGTCGCTGCGTACCCTGACCAACGCCAGCCGCCG
GGGAGGGCTGGATATCAAGCTGCCGCTGACCATCTACAACACCTCATGCTACCGGGGGATCCCTGGCAGATATATCGCTG
CCGGACCACTGGCTTCACGCTGGCTGCAACAGGTTTTTGCGACCGACGCCACCCTGGTGCAAAGCGGCGCAGTGATCCTT
GGTGAACCGGCGGCAGGCTATGTGTCCCATGAAGGCTATGCCGCGCTTGCCCGGGCTCCCTATCGCTACCAGGAAATGCT
TGGTGTTATCTGGCGGGAGAATCCGTGCCGCTGGCTGAAACCGGATGAAAGTCCTGTTCTGATGGCAACACTGATGGAGT
GCGACGAAAACAATCAGCCGCTGGCAGGCGCATATATCGACCGCTCCGGACTGGACGCTGAAACCTGGCTTACGCAATTG
TTCCGGGTGGTTGTGGTTCCGCTGTATCACCTGCTTTGCCGCTACGGTGTCGCGCTTATTGCACACGGACAAAATATAAC
GCTCGCCATGAAAGAGGGGGTACCACAGCGTGTTCTGCTGAAAGACTTCCAGGGCGATATGCGGCTGGTGAAAGAAGCGT
TTCCCGAAATGGATTCTTTGCCTCAGGAGGTGCGTGATGCCACATCCCGTCTGAGTGCGGACTACTTAATCCATGATTTG
CAGACGGGTCACTTCGTGACAGTACTGCGTTTTATTTCGCCACTGATGGTTCGTCTTGGCGTACCTGAAAGGCGATTTTA
TCAACTGCTGGCAGCAGTGTTGAGTGATTACATGAACAAACATCCACAAATGGCAGAGCGTTTTGCGCTTTTCTCACTCT
TCAGGCCACAAATCATTCGCGTGGTGCTGAACCCGGTAAAACTGACCTGGCCGGACCTGGATGGCGGCAGTCGCATGCTG
CCGAATTACCTTGAGAATCTGCAAAATCCGCTGTGGCTGGTAACTCAGGAATATGAATCATGA

Protein sequence :
MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGAQWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQ
LKPVLSMSDATVAEHMQDLYATLLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPLPVHPWQWQQKIATDFIADFVEG
RMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVIL
GEPAAGYVSHEGYAALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQL
FRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEAFPEMDSLPQEVRDATSRLSADYLIHDL
QTGHFVTVLRFISPLMVRLGVPERRFYQLLAAVLSDYMNKHPQMAERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRML
PNYLENLQNPLWLVTQEYES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 99
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 99
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 99
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 99
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
iucC YP_410583.1 siderophore biosynthesis protein VFG1083 Protein 0.0 99
iucC YP_410583.1 siderophore biosynthesis protein VFG0938 Protein 0.0 99
iucC YP_410583.1 siderophore biosynthesis protein VFG0617 Protein 0.0 99