|
Name : arsB (SBO_3500) Accession : YP_409813.1 Strain : Shigella boydii Sb227 Genome accession: NC_007613 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 3493874 - 3495184 bp Length : 1311 bp Strand : + Note : Code: P; COG: COG1055 DNA sequence : GTGTTTTATCCAGGAGGCATTATGTTACTGGCAGGCGCTATCTTTGTCCTGACCATTGTATTGGTTATCTGGCAGCCGAA AGGTTTAGGCATCGGCTGGAGTGCAACGCTCGGCGCAGTACTGGCGTTAGTTACGGGCGTGGTCCATCCGGGTGATATTC CGGTGGTGTGGAATATCGTCTGGAACGCGACGGCTGCGTTTATCGCCGTCATTATCATCAGCCTGCTGCTGGATGAGTCC GGCTTTTTTGAATGGGCGGCGCTGCACGTCTCACGCTGGGGTAATGGTCGTGGTCGCTTGCTGTTTACCTGGATTGTCCT GCTCGGTGCTGCCGTTGCCGCCCTGTTTGCCAATGATGGCGCAGCGCTTATTTTGACGCCGATTGTCATCGCCATGCTGC TGGCTTTAGGATTCAGTAAAGGCACGACGCTGGCGTTCGTGATGGCGGCCGGATTCATTGCCGATACCGCCAGCCTGCCG CTTATTGTCTCCAACCTGGTGAATATCGTTTCCGCTGATTTCTTTGGCCTCGGCTTTCGCGAATACGCCTCGGTGATGGT GCCGGTGGATATCGCCGCGATTGTTGCCACGCTGGTGATGCTACATCTCTATTTTCGCAAAGATATTCCGCAGAACTACG ATATGGCGCTGCTGAAATCTCCCGCAGAAGCGATCAAAGATCCTGCTACGTTCAAAACTGGCTGGGTTGTTTTACTGCTT CTGCTGGTGGGATTTTTCGTCCTGGAACCGCTCGGCATTCCGGTGAGCGCCATTGCAGCTGTGGGCGCGCTGATATTATT TGTCGTCGCTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAAATTGTCATCTTCTCGC TCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCG GATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGAC GGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCACGGCATCTGGCGTTATCAAAGAAGCGATGGTTTATGCCAATGTGA TTGGCTGCGATTTGGGACCGAAAATTACCCCAATTGGTAGCCTGGCTACACTACTCTGGCTGCACGTACTTTCGCAGAAG AATATGACTATCAGCTGGGGATATTACTTCCGTACAGGGATTATCATGACCCTGCCTGTGCTGTTTGTGACGCTGGCTGC GCTGGCGCTACGTCTCTCTTTCACTTTGTAA Protein sequence : MFYPGGIMLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPGDIPVVWNIVWNATAAFIAVIIISLLLDES GFFEWAALHVSRWGNGRGRLLFTWIVLLGAAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLP LIVSNLVNIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAIKDPATFKTGWVVLLL LLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLA DNGLWAATLGTGFLTAFLSSIMNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQK NMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 2e-156 | 92 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 3e-95 | 59 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 1e-94 | 59 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 1e-98 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| arsB | YP_409813.1 | arsenical pump membrane protein | BAC0578 | Protein | 8e-161 | 94 |
| arsB | YP_409813.1 | arsenical pump membrane protein | BAC0576 | Protein | 8e-160 | 94 |
| arsB | YP_409813.1 | arsenical pump membrane protein | BAC0031 | Protein | 5e-156 | 91 |
| arsB | YP_409813.1 | arsenical pump membrane protein | BAC0577 | Protein | 1e-154 | 90 |
| arsB | YP_409813.1 | arsenical pump membrane protein | BAC0574 | Protein | 2e-96 | 60 |
| arsB | YP_409813.1 | arsenical pump membrane protein | BAC0575 | Protein | 9e-100 | 60 |
