Gene Information

Name : insB (SBO_3488)
Accession : YP_409801.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Unknown
Product : IS1 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1662
EC number : -
Position : 3479251 - 3479763 bp
Length : 513 bp
Strand : +
Note : Code: L; COG: COG1662

DNA sequence : 
ATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCATTAAAAAACTCAGGCC
GCAGTCGGTAACCTCGCGCATGCAAGCTGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACAGTGGGGCTACGTCG
GTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAA
CGCACTCTGGCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGGCC
GCTGTATGAATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGA
ATCTGAGACAACATCTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATC
GGGCATTATCTGAACATAAAACACTATCAGTAA

Protein sequence : 
MASDVAPVHALWALASTRFYVIKKLRPQSVTSRMQAGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGE
RTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVI
GHYLNIKHYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 4e-49 98
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 1e-57 97
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 1e-57 97
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 8e-57 96
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 7e-57 96
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 1e-56 96
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-56 94
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-56 92
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-56 92
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-56 92
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 4e-54 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insB YP_409801.1 IS1 ORF2 VFG0612 Protein 5e-57 94