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Name : gspL (SBO_3020) Accession : YP_409356.1 Strain : Shigella boydii Sb227 Genome accession: NC_007613 Putative virulence/resistance : Virulence Product : GspL-like protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3297 EC number : - Position : 3020053 - 3020913 bp Length : 861 bp Strand : + Note : general secretion pathway for protein export (GSP); similar to general secretory pathway protein L DNA sequence : GTGATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCAGA CTGGATGTCCATTCCTTGTGGGGTTATGGCTGGCGATGCGCAACGGGTTATCTGCCGCATTGATGAATGCCGGGGATGGA GCGCCGGGCGGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGGATTTACCGCTTTCGCTAACCGTAGTC GGCATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCGTTAC CACTTATGGCGAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCT GGCGGGTGATGATTCTGCCGATATTGCTGATTCTAGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGC GAACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTT ACGCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGA TAGCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGTGGTTTTACCTTTGATCAAAAACGCCAGATACTT CACCTCCAGCTACGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGTGCACTGGCAACCGATTATGTTGTGCAACA GGACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAACGTTGCGGAGGAAATAA Protein sequence : MIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGVMAGDAQRVICRIDECRGWSAGRALAPVMFRAQLNEQDLPLSLTVV GIAPEKLSAWAGADAERLTVTALPAVTTYGEPEGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVS EQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEMRGFTFDQKRQIL HLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspL | YP_854399.2 | GspL-like protein | Not tested | PAI I APEC-O1 | Protein | 2e-119 | 96 |
| gspL | CAE85226.1 | GspL, hypotehtical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-117 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspL | YP_409356.1 | GspL-like protein | VFG2055 | Protein | 4e-119 | 97 |
