Gene Information

Name : gspI (SBO_3017)
Accession : YP_409353.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Virulence
Product : type II secretion protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3017791 - 3018162 bp
Length : 372 bp
Strand : +
Note : Code: NU; COG: COG2165

DNA sequence : 
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGTGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCACGTTCTTGAGGAAAAAACGGTAGCGGGCTGGGTAGCTGAAAACCAGACTGCGC
TGCTCTACCTGATGACCCGTGAGCAGCGGGCGGTCAGGCATCAGGGCGAGAGCGATATGGCAGGAAGCCGCTGGTACTGG
CGAACAATCCCATTGAATACAGGCAACGCGCTGCTCCAGGCGGTGGATATTGAAGTCAGCCGTCACGAAGACTTTTCGTC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence : 
MKRGFTLLEVMLVLAIFALAATAVLQIASGALSNQHVLEEKTVAGWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYW
RTIPLNTGNALLQAVDIEVSRHEDFSSVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-44 97
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 1e-42 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI YP_409353.1 type II secretion protein VFG2052 Protein 1e-45 96