Gene Information

Name : gspG (SBO_3015)
Accession : YP_409351.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Virulence
Product : type II secretion protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3016772 - 3017227 bp
Length : 456 bp
Strand : +
Note : Code: NU; COG: COG2165

DNA sequence : 
ATGAATTCGTTATCCCGCACACACAAACCACGGGCAGGTTTTACCCTGCTGGAAGTGATGGTGGTGATTGTTATTCTTGG
CGTCCTGGCAAGTCTGGTGGTGCCTAACCTGTTGGGCAACAAAGAGAAAGCCAATCGGCAAAAAGCCATCAGCGATATCG
TGGCGCTGGAAAACGCACTAGATATGTACCGACTGGATAACGGGCGTTATCCGACCACAGAACAGGGGCTGGAAGCGCTG
ATCCAGCAGCCAGCCAATATGGCGGACTCCCGCAACTACCGTACTGGTGGATACATCAAACGACTGCCAAAGGATCCGTG
GGGCAATGATTATCAGTATCTCAGCCCGGGTGAAAAAGGACTGTTTGATGTTTATACCCTGGGGGCGGATGGTCAGGAAA
ACGGGGAAGGCGCTGGCGCAGATATCGGTAACTGGAATTTGCAGGAGTTTCAGTAA

Protein sequence : 
MNSLSRTHKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKANRQKAISDIVALENALDMYRLDNGRYPTTEQGLEAL
IQQPANMADSRNYRTGGYIKRLPKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-65 99
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-66 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspG YP_409351.1 type II secretion protein VFG2050 Protein 4e-66 99
gspG YP_409351.1 type II secretion protein VFG0180 Protein 1e-37 55
gspG YP_409351.1 type II secretion protein VFG1871 Protein 7e-34 53