Gene Information

Name : SBO_2391 (SBO_2391)
Accession : YP_408780.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Unknown
Product : IS911 ORF2
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2380676 - 2381197 bp
Length : 522 bp
Strand : -
Note : Code: L; COG: COG2801

DNA sequence : 
GTGACTGAGCCAAATCAGGTGTGGTGCGGTGATGTGACCTGTATCTGGACGGGTAAGCGCTGGGCGTACCTCGCCGTTGT
TCTCGACCTGTTCGCAAGAAAACCAGTGGGCTGGGCCATGTCGTTCTCGCCGGACAGCAGGCTCACCATGAAAGCGCTGG
AAATGGCATGGGAAACCCGTGGTAAGCCCGGCGGGGTGATGTTCCACAGCGATCAGGGCAGTCATTATACGAGCAGGCAG
TTCCGGCAGTTATTGTGGCGATACCAGATCAGACAGAGTATGAGCCGGCGCGGAAACTGCTGGGATAACAGCCCAATGGA
ACGCTTCTTCAGGAGTCTGAAGAACGAATGGATGCCGGTGGTGGGTTACGTAAGCTTCAGCGAGGCAGCTCACGCCATAA
CGGACTATATCGTTGGATATTACAGCGCACTAAGACCGCACGAATATAACGGTGGGTTCCCCCCAAACGAATCGGAAAAT
CGATACTGGAAAAACTCTAACTCGGTGGCCAGTTTTTGTTGA

Protein sequence : 
MTEPNQVWCGDVTCIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQ
FRQLLWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYSALRPHEYNGGFPPNESEN
RYWKNSNSVASFC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 3e-73 90
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 3e-73 90
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-50 63
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-50 63
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 3e-51 61
unnamed AAC31485.1 L0006 Not tested LEE Protein 2e-51 61
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 2e-51 61
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-51 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBO_2391 YP_408780.1 IS911 ORF2 VFG1484 Protein 1e-73 90
SBO_2391 YP_408780.1 IS911 ORF2 VFG0785 Protein 7e-52 61