Gene Information

Name : SBO_1635 (SBO_1635)
Accession : YP_408073.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Unknown
Product : ISSfl4 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1622781 - 1623200 bp
Length : 420 bp
Strand : +
Note : Code: L; COG: COG2963

DNA sequence : 
ATGGAACAGAAAGCATTATCTGCAGAACCCCGCAGATCATTTTCAAATGAGTTTAAACTTCAAATGGTTAAACTGGCTTC
ACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTGCTGTTTAAATGGCTCAGGCTCT
GGCAGAACGAAGGGCGCATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGACACTGGCGTTGAATTATTACCTGTGGAG
ATAACGCCGGATGAGCCGAAAGAACCTGTGGCTGCTCTTACTCCGTCTTTATCTACTCAGACTACAGTTAGTGCCAGCTC
CTGCAAGGTGGAGTTCCGTCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCTGCTCACAGTGTTGATCCGTGAAC
TGACCGGGAGGGGACGATGA

Protein sequence : 
MEQKALSAEPRRSFSNEFKLQMVKLASQPGASVARIAREHDINDNLLFKWLRLWQNEGRISRRLPVTTSSDTGVELLPVE
ITPDEPKEPVAALTPSLSTQTTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1159 NP_286694.1 hypothetical protein Not tested TAI Protein 8e-55 92
Z1598 NP_287102.1 hypothetical protein Not tested TAI Protein 8e-55 92
unnamed CAD66191.1 hypothetical protein Not tested PAI III 536 Protein 1e-51 87
Z1648 NP_287151.1 hypothetical protein Not tested TAI Protein 3e-51 86
Z1208 NP_286743.1 hypothetical protein Not tested TAI Protein 7e-52 86
ECO103_3566 YP_003223429.1 hypothetical protein Not tested LEE Protein 5e-49 81
unnamed CAD66197.1 hypothetical protein Not tested PAI III 536 Protein 1e-40 80
ECUMN_3365 YP_002414038.1 putative transposase Not tested Not named Protein 4e-32 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBO_1635 YP_408073.1 ISSfl4 ORF1 VFG1666 Protein 5e-52 87
SBO_1635 YP_408073.1 ISSfl4 ORF1 VFG1672 Protein 4e-41 80
SBO_1635 YP_408073.1 ISSfl4 ORF1 VFG1738 Protein 1e-32 57