Gene Information

Name : SBO_1607 (SBO_1607)
Accession : YP_408045.1
Strain : Shigella boydii Sb227
Genome accession: NC_007613
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 1596907 - 1597188 bp
Length : 282 bp
Strand : +
Note : Code: L; COG: COG2963

DNA sequence :
TTGGCAGCATTACCCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGATCAGTGAAGGCGCTTCCCGATT
ATCCCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTACTCCTGGTTCCCGCACGGTGG
CTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAGCGAGATATATTAAAAAAAGCA
ACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence :
MAALPKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLERDILKKA
TAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 8e-34 100
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 8e-34 100
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 7e-34 100
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-33 100
unnamed AAF09021.1 unknown Not tested SHI-O Protein 2e-33 99
unnamed AAF09029.1 unknown Not tested SHI-O Protein 2e-33 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SBO_1607 YP_408045.1 IS600 ORF1 VFG1707 Protein 3e-34 100